Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR22-201ENST00000362190 85 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 RNU6-778P-201ENST00000363269 103 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 SNORA71.1-201ENST00000364523 117 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 SNORA9-201ENST00000384215 133 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 MIR1-2-201ENST00000384961 85 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 MIR454-201ENST00000390180 115 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 RNA5SP274-201ENST00000410484 108 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC245054.2-201ENST00000415639 319 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC073464.1-201ENST00000429823 534 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC109927.2-201ENST00000506416 303 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC098799.2-201ENST00000509466 868 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC008885.1-201ENST00000514930 301 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 RN7SKP272-201ENST00000516988 232 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 OR4R1P-201ENST00000529879 463 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC007151.1-201ENST00000572774 483 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC138761.3-201ENST00000579993 334 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AL161756.2-201ENST00000604597 246 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 MIR15A-201ENST00000607334 83 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AP001486.3-201ENST00000615334 372 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 AL512643.1-201ENST00000635735 524 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 MIR422A-201ENST00000362286 90 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC093151.1-201ENST00000427711 313 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 RN7SL283P-201ENST00000489055 303 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC079382.1-201ENST00000493346 557 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC091435.1-201ENST00000505442 584 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 RNU6-1315P-201ENST00000517187 99 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 H3F3AP1-201ENST00000559984 334 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AL022154.1-201ENST00000604698 785 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AC073534.2-201ENST00000620377 381 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 AL157786.1-207ENST00000627771 695 ntBASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUP54Q7Z3B4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RNU6-1120P-201ENST00000362988 108 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RNU4-48P-201ENST00000365559 182 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 SNORA4.3-201ENST00000365564 137 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RNU1-73P-201ENST00000383971 164 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RNU6-606P-201ENST00000384721 111 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 U3.26-201ENST00000391236 204 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AL138885.1-201ENST00000405921 675 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 MTATP6P18-201ENST00000417994 673 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 DNAJC19P4-201ENST00000440115 345 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AL671855.1-201ENST00000446875 1203 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 TPTE2P5-203ENST00000458118 728 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RNU7-182P-201ENST00000459009 62 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RPS29P20-201ENST00000489592 171 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RPS27AP10-201ENST00000496103 208 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC098591.2-201ENST00000510152 315 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 Y_RNA.655-201ENST00000515919 96 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 RNU6-123P-201ENST00000516163 102 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 SNORD19.2-201ENST00000516978 73 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 OR5BN1P-201ENST00000532955 829 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 MIR4325-201ENST00000583049 90 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC008521.1-201ENST00000587471 187 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC078795.2-201ENST00000602835 1252 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC139792.2-201ENST00000624218 587 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 AC005609.4-201ENST00000625071 447 ntBASIC2.8□□□□□ -1.96
NUP54Q7Z3B4 SEPT14P19-203ENST00000633205 211 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms