Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-985P-201ENST00000410182 104 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 MYL8P-204ENST00000431574 518 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RPS23P3-201ENST00000470993 430 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RPL29P14-201ENST00000495837 428 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RNU1-86P-201ENST00000516108 154 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RNU1-107P-201ENST00000516617 154 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RNU7-143P-201ENST00000516781 65 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RNA5SP290-201ENST00000517133 127 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AC005255.1-201ENST00000593748 216 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 HMGB1P50-201ENST00000605814 607 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 FP236240.3-201ENST00000623061 327 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AL161912.2-201ENST00000565707 3007 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AC010733.2-201ENST00000589496 5702 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.2-201ENST00000362330 96 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 SNORA71.3-201ENST00000362582 128 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 SNORD35B-201ENST00000363660 87 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-306P-201ENST00000384617 107 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-1105P-201ENST00000384774 107 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 MIR7-3-201ENST00000384898 110 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 MIR607-201ENST00000385241 96 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AL030996.1-201ENST00000411430 235 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 SYF2P2-201ENST00000417620 583 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AC015911.1-201ENST00000495111 156 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 HMGN1P11-201ENST00000508668 303 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-264P-201ENST00000517134 104 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 DNAJC8P1-201ENST00000554535 372 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 MIR3671-201ENST00000580455 88 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 MIR4680-201ENST00000580906 66 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AC020914.4-201ENST00000597690 277 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AL645944.1-201ENST00000603857 493 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 MIR7702-201ENST00000621931 59 ntBASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.45□□□□□ -1.7
RUFY4Q6ZNE9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.428-201ENST00000384078 102 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 MIR30B-201ENST00000384850 88 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 SNORA3C-201ENST00000408792 125 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-55P-201ENST00000411092 107 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC113618.1-201ENST00000416747 285 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 RPL23AP83-201ENST00000434984 473 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 SNRPEP4-201ENST00000435815 279 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC011816.1-201ENST00000441346 546 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AL133547.1-201ENST00000448546 220 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC021146.2-201ENST00000504736 556 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC116655.1-201ENST00000508324 901 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC005921.1-201ENST00000510589 286 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC104576.1-201ENST00000524225 88 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 GNAI2P1-201ENST00000541815 315 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 TRAV28-201ENST00000557548 323 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 BNIP3P16-201ENST00000589779 534 ntBASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.44□□□□□ -1.7
RUFY4Q6ZNE9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms