Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC022893.3-201ENST00000607665 437 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 FER-210ENST00000628534 558 ntTSL 5 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL035425.3-201ENST00000564206 4996 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 RNU4-12P-201ENST00000365233 139 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA9.2-201ENST00000365361 133 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-996P-201ENST00000365438 107 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA69-201ENST00000383895 132 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-483P-201ENST00000384088 108 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 MIR23A-201ENST00000385245 73 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA11.1-201ENST00000408133 129 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 RNU2-29P-201ENST00000410423 189 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC104332.2-201ENST00000429959 156 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL591212.2-201ENST00000433923 257 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC244505.4-201ENST00000434905 287 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 SSXP5-201ENST00000443473 287 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL118520.1-201ENST00000450770 291 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 RPS29P15-201ENST00000458329 171 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 KC877373.1-201ENST00000479066 408 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 RPS29P25-201ENST00000481709 171 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL163973.1-201ENST00000484753 577 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC109927.2-201ENST00000506416 303 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AF213884.2-201ENST00000510417 903 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC022690.1-201ENST00000526681 550 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 MTCO3P24-201ENST00000572729 782 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AL162413.1-201ENST00000603198 110 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 AC090617.7-201ENST00000623952 126 ntBASIC3.45□□□□□ -1.86
SYNE3Q6ZMZ3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RNY3P3-201ENST00000363816 102 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA51.4-201ENST00000364993 124 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 MIR491-201ENST00000384877 84 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RPS4XP3-201ENST00000398541 413 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 MIR1277-201ENST00000408536 78 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RNU4-46P-201ENST00000410818 138 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 SNRPEP10-201ENST00000420249 274 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RPL35AP12-201ENST00000425362 338 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 DPPA3P1-201ENST00000448050 469 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AL162395.1-201ENST00000457882 422 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RNA5SP310-201ENST00000459084 116 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-914P-201ENST00000516749 109 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.704-201ENST00000516851 102 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AP003122.3-201ENST00000526316 255 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC084851.1-201ENST00000529105 249 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 MIR4325-201ENST00000583049 90 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC104458.1-201ENST00000608243 463 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC130324.3-201ENST00000614165 542 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 AC007014.2-201ENST00000615581 479 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 MIR6076-201ENST00000617521 113 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNE3Q6ZMZ3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-552P-201ENST00000362869 119 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-1090P-201ENST00000364065 94 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU1-140P-201ENST00000365040 165 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-550P-201ENST00000391057 101 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SNORD115-47-201ENST00000391226 86 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-903P-201ENST00000391270 109 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms