Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 BX295541.1-201ENST00000417774 250 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 PIGFP2-201ENST00000421400 651 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 RPL31P35-201ENST00000431058 377 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC009296.1-201ENST00000443146 155 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 TPT1P7-201ENST00000458300 517 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 RNU7-51P-201ENST00000516560 62 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 RNU6-1092P-201ENST00000516955 87 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 RNA5SP471-201ENST00000516971 106 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 RNU6-430P-201ENST00000517078 107 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 MTCO2P4-201ENST00000517968 247 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 ATP5F1P5-201ENST00000526403 760 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC087883.1-201ENST00000551882 391 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC103810.1-201ENST00000579873 453 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC079089.3-201ENST00000603094 673 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AL161729.4-201ENST00000604650 476 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC098614.4-201ENST00000607601 462 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC005332.10-201ENST00000612725 619 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC091834.1-201ENST00000614543 472 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 AC007785.2-201ENST00000598627 1916 ntBASIC2.57□□□□□ -2
RFWD3Q6PCD5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.57□□□□□ -2
RFWD3Q6PCD5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RFWD3Q6PCD5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNU6-960P-201ENST00000364056 120 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNU6-169P-201ENST00000365336 107 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 OR5H15-201ENST00000383696 930 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNU6-701P-201ENST00000384059 107 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 SNORA67.4-201ENST00000384688 142 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 RPS24P1-201ENST00000438550 371 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 HMGB3P12-201ENST00000438745 556 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC010099.1-201ENST00000455434 375 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC013267.1-201ENST00000458227 267 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC087588.1-201ENST00000462203 316 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 RPL23AP45-201ENST00000476406 468 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 SNORA31.3-201ENST00000516029 96 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNU6-405P-201ENST00000516637 110 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNU6-1282P-201ENST00000516735 96 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AP006587.4-201ENST00000526053 529 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC068790.2-201ENST00000602601 557 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 DPPA3P3-201ENST00000603842 430 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AP002360.4-201ENST00000606980 481 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC103591.3-201ENST00000608684 209 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC104073.3-201ENST00000610942 955 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC099842.1-201ENST00000619919 596 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 AC068137.4-201ENST00000638485 296 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 TPTE2P4-201ENST00000258589 1605 ntBASIC2.56□□□□□ -2
RFWD3Q6PCD5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
RFWD3Q6PCD5 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 RNA5SP126-201ENST00000365092 109 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFWD3Q6PCD5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 RNU6-39P-201ENST00000384344 107 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 MIR558-201ENST00000384920 94 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 RNU2-33P-201ENST00000410344 192 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 RNU2-16P-201ENST00000410712 136 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFWD3Q6PCD5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFWD3Q6PCD5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 RNA5SP291-201ENST00000517222 105 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms