Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 IMMP1LP2-201ENST00000552954 492 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC090115.3-201ENST00000553218 849 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RPL23AP84-201ENST00000571193 464 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC006270.2-201ENST00000578523 652 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 MIR4276-201ENST00000584832 70 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC023043.2-201ENST00000589678 1026 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC006504.6-201ENST00000590142 199 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AL162713.1-201ENST00000604480 262 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AL031176.1-201ENST00000604554 466 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 FAM157A-202ENST00000615155 405 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AL355365.1-201ENST00000616480 294 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC098657.3-201ENST00000620434 263 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 uc_338.22-201ENST00000622722 187 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.197-201ENST00000364004 102 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 RNU6-14P-201ENST00000384630 106 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 SNORA16.2-201ENST00000390991 127 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 RNA5SP171-201ENST00000391071 115 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 MTCYBP4-201ENST00000401524 249 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 RNU6-370P-201ENST00000411008 104 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC074085.1-201ENST00000413598 418 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AL358232.1-201ENST00000448030 501 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC125238.1-201ENST00000448842 249 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC107399.1-201ENST00000451226 265 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 APOOP4-201ENST00000513530 597 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC093303.1-201ENST00000514549 295 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC022893.3-201ENST00000607665 437 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AC244517.12-201ENST00000623581 663 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 AL137003.2-201ENST00000606924 2538 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 GABPAP-201ENST00000419271 1356 ntBASIC3.24□□□□□ -1.89
ZNF549Q6P9A3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RNA5SP50-201ENST00000363731 107 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1188P-201ENST00000363795 107 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.202-201ENST00000364083 110 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RNU1-33P-201ENST00000364249 162 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RNA5SP167-201ENST00000365461 116 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 SNORA22B-201ENST00000383876 138 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.422-201ENST00000384054 114 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL139397.2-201ENST00000404529 772 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RPL37P10-201ENST00000412884 288 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 BX682237.1-201ENST00000415016 335 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 CST9LP2-201ENST00000437612 320 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL137792.2-201ENST00000443484 235 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 ELOCP24-201ENST00000456370 334 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL136097.1-201ENST00000456945 913 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RN7SKP24-201ENST00000515888 284 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 RNU6-189P-201ENST00000516120 101 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC022634.1-201ENST00000520765 532 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AP006587.4-201ENST00000526053 529 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AP000763.2-201ENST00000540641 163 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 MTCO3P23-201ENST00000561363 289 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 MIR4790-201ENST00000577799 79 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AF038458.1-201ENST00000588406 262 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL670379.6-201ENST00000603753 252 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC008162.1-201ENST00000604718 254 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL670379.1-201ENST00000604752 252 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL670379.5-201ENST00000605253 252 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms