Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC092106.3-201ENST00000611308 722 ntBASIC1.97□□□□□ -2.09
H3F3CQ6NXT2 AL356266.1-201ENST00000623311 483 ntBASIC1.97□□□□□ -2.09
H3F3CQ6NXT2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.97□□□□□ -2.09
H3F3CQ6NXT2 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
H3F3CQ6NXT2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.97□□□□□ -2.09
H3F3CQ6NXT2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AP006437.1-201ENST00000641440 3685 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 USP9YP6-201ENST00000413550 854 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 RPS24P7-201ENST00000416921 246 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC106883.1-201ENST00000418805 562 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC005005.2-201ENST00000420779 380 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 CR769776.1-201ENST00000441254 787 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 RPL7P12-201ENST00000446719 750 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 OR6C5P-201ENST00000452388 923 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 FABP5P15-201ENST00000453566 214 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 RNU7-59P-201ENST00000459101 61 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 SNORA25.11-201ENST00000515935 105 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC025755.1-201ENST00000521306 278 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 DUXAP1-201ENST00000556632 463 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 MIR3124-201ENST00000582636 67 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 U6.99-201ENST00000637524 83 ntBASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.1
H3F3CQ6NXT2 Z75746.1-201ENST00000440243 2080 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 NACAP2-201ENST00000318548 624 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 RNU6-157P-201ENST00000383957 107 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 MIR513B-201ENST00000385136 84 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AL139397.2-201ENST00000404529 772 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 MIR1302-8-201ENST00000408342 128 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 HMGB1P11-201ENST00000413899 637 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AL008987.1-201ENST00000415528 237 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC084290.1-201ENST00000434995 374 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC106872.3-201ENST00000495104 446 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 RNU6-581P-201ENST00000516214 105 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 RNU6-703P-201ENST00000516946 107 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 RNU6-64P-201ENST00000517119 105 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 SNORA31.25-201ENST00000517242 134 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 EEF1A1P37-201ENST00000522748 715 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 MTND4P33-201ENST00000556706 766 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 MTND1P8-201ENST00000571424 950 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC078899.2-201ENST00000595282 212 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AL391001.1-201ENST00000602747 715 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC068790.3-201ENST00000602988 553 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC016597.2-201ENST00000613256 341 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC024581.2-201ENST00000619986 252 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 AC110994.2-201ENST00000635481 492 ntBASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3CQ6NXT2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 OR56A5-201ENST00000340110 738 ntBASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 RNA5SP88-201ENST00000365560 109 ntBASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 AL359634.1-202ENST00000404721 284 ntBASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 RN7SKP266-201ENST00000410232 287 ntBASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 MTCO2P21-201ENST00000419780 677 ntBASIC1.94□□□□□ -2.1
H3F3CQ6NXT2 ISCA1P1-201ENST00000426679 387 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms