Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR450B-201ENST00000401182 78 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 U3.37-201ENST00000408528 213 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 Y_RNA.604-201ENST00000410574 102 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC245291.1-201ENST00000419501 328 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 snoU109.2-201ENST00000459316 135 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RNU7-138P-201ENST00000459479 64 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 HMGN1P12-201ENST00000499125 195 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC113155.1-201ENST00000511141 769 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RAC1P2-201ENST00000511164 579 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RNU4-49P-201ENST00000516080 140 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RNA5SP208-201ENST00000516156 78 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 Y_RNA.702-201ENST00000516843 96 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC068657.1-201ENST00000520807 306 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 UBE2V2P2-201ENST00000587677 504 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC024220.1-201ENST00000603675 484 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 MIR6758-201ENST00000620653 63 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 MIR148B-201ENST00000362252 99 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RNU1-64P-201ENST00000365443 163 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RNU6-72P-201ENST00000384285 79 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RN7SKP32-201ENST00000410167 303 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 Y_RNA.625-201ENST00000411256 107 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AC023141.4-201ENST00000412031 328 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 MTND3P8-201ENST00000412909 339 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AC126124.2-201ENST00000413542 321 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AL096701.2-201ENST00000416920 238 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AL365496.1-201ENST00000426885 215 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RPS15AP5-201ENST00000436276 388 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RPL23AP22-201ENST00000437556 453 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RPS3AP46-201ENST00000448352 682 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AC233279.1-201ENST00000455300 423 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RNU6-329P-201ENST00000459618 107 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AC008628.2-201ENST00000502605 298 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 RNU6-85P-201ENST00000605989 107 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 Z69720.2-201ENST00000624755 279 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 SCARNA4-202ENST00000625402 129 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 AC007496.3-201ENST00000624987 3443 ntBASIC3.49□□□□□ -1.85
RNF220Q5VTB9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF220Q5VTB9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 SPRR2C-201ENST00000290702 219 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 RNU6-1252P-201ENST00000363054 104 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 RNU6-867P-201ENST00000364956 107 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 RNU6-213P-201ENST00000384051 104 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 VN1R36P-201ENST00000414936 291 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC016831.2-201ENST00000417179 352 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 MTND4LP16-201ENST00000440828 295 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 HMGN1P11-201ENST00000508668 303 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 RNU6-864P-201ENST00000516256 108 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC022634.1-201ENST00000520765 532 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 SNORA62.6-201ENST00000606322 83 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AL355073.2-201ENST00000612106 557 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 MAPK10-322ENST00000641485 4530 ntBASIC3.48□□□□□ -1.85
RNF220Q5VTB9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RNF220Q5VTB9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms