Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC098591.2-201ENST00000510152 315 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC243829.6-201ENST00000612652 106 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 MTND2P41-201ENST00000637599 773 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 MTND4P8-201ENST00000514997 1362 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 MRPS36P1-201ENST00000421291 307 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC023932.2-201ENST00000603176 175 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC025588.2-201ENST00000604851 466 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC092192.1-201ENST00000633154 1018 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 RNU6-452P-201ENST00000384406 107 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 RNU6-821P-201ENST00000390995 107 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AC241584.1-201ENST00000438469 1241 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AC147055.4-201ENST00000504399 745 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP188Q5SRE5 DEFB108D-201ENST00000527787 222 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AP003484.1-201ENST00000530974 250 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.85□□□□□ -2.27
NUP188Q5SRE5 EEF1B2P4-201ENST00000551398 348 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AL133241.1-201ENST00000556832 487 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 AL590410.1-201ENST00000617925 333 ntBASIC0.85□□□□□ -2.27
NUP188Q5SRE5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NUP188Q5SRE5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
NUP188Q5SRE5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
NUP188Q5SRE5 RNU6-374P-201ENST00000364146 108 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 RNU6-1035P-201ENST00000384477 107 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 Y_RNA.518-201ENST00000384552 113 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 SNORA40.19-201ENST00000390846 128 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 MIR1303-201ENST00000408625 86 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 MTND2P19-201ENST00000449129 1012 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 RNU6-362P-201ENST00000516736 90 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 MIR3921-201ENST00000577308 85 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.84□□□□□ -2.27
NUP188Q5SRE5 AP001269.3-201ENST00000588718 329 ntBASIC0.84□□□□□ -2.27
NUP188Q5SRE5 MIR26B-201ENST00000362251 77 ntBASIC0.84□□□□□ -2.28
NUP188Q5SRE5 RNA5SP240-201ENST00000365355 128 ntBASIC0.84□□□□□ -2.28
NUP188Q5SRE5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.84□□□□□ -2.28
NUP188Q5SRE5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.84□□□□□ -2.28
NUP188Q5SRE5 AC018437.1-201ENST00000492214 406 ntBASIC0.84□□□□□ -2.28
NUP188Q5SRE5 AC243960.4-201ENST00000600532 288 ntBASIC0.84□□□□□ -2.28
NUP188Q5SRE5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.84□□□□□ -2.28
NUP188Q5SRE5 MIR7157-201ENST00000635801 60 ntBASIC0.84□□□□□ -2.28
NUP188Q5SRE5 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NUP188Q5SRE5 RNU6-270P-201ENST00000364131 105 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.83□□□□□ -2.28
NUP188Q5SRE5 AC004854.1-201ENST00000440356 349 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 FGF7P5-201ENST00000441829 291 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.83□□□□□ -2.28
NUP188Q5SRE5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.83□□□□□ -2.28
NUP188Q5SRE5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.83□□□□□ -2.28
NUP188Q5SRE5 SNORA31.13-201ENST00000516624 135 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 AC074051.3-201ENST00000570238 358 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 BNIP3P25-201ENST00000596023 559 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 HSPE1P19-201ENST00000603327 295 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 AC055876.5-201ENST00000605667 259 ntBASIC0.83□□□□□ -2.28
NUP188Q5SRE5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 RNU6-222P-201ENST00000362438 107 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 RNU6-989P-201ENST00000362756 107 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 RNU6-98P-201ENST00000384173 107 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 RNA5SP63-201ENST00000391225 112 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AC113398.2-201ENST00000507630 558 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 RNU6-798P-201ENST00000516912 103 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 HAUS1P3-201ENST00000523909 662 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.82□□□□□ -2.28
NUP188Q5SRE5 AC008443.7-201ENST00000622195 246 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 Z69720.2-201ENST00000624755 279 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 OR5H6-203ENST00000642105 978 ntBASIC0.82□□□□□ -2.28
NUP188Q5SRE5 Y_RNA.390-201ENST00000383932 102 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 RNU6-730P-201ENST00000383954 104 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 HMGN2P39-201ENST00000398005 273 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 DSTNP4-201ENST00000399472 474 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 NDUFS5P1-201ENST00000405668 289 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 HSPE1P21-201ENST00000438283 308 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.81□□□□□ -2.28
NUP188Q5SRE5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.81□□□□□ -2.28
NUP188Q5SRE5 AL590365.1-201ENST00000450788 243 ntBASIC0.81□□□□□ -2.28
NUP188Q5SRE5 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.81□□□□□ -2.28
NUP188Q5SRE5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms