Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 MTCO3P18-201ENST00000440206 761 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 PRPS1P1-201ENST00000445305 876 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AL583843.1-201ENST00000456070 346 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 RNU7-167P-201ENST00000459160 62 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-1208P-201ENST00000459588 107 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 RPS27AP10-201ENST00000496103 208 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 Y_RNA.654-201ENST00000497848 106 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AC034105.4-201ENST00000568304 277 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 MIR1254-2-201ENST00000579553 63 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AL355598.1-201ENST00000604169 202 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 DUXAP9-208ENST00000622815 614 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 AC090617.10-201ENST00000624308 134 ntBASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
RUNDC3AQ59EK9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 MIR412-201ENST00000362142 91 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 Y_RNA.157-201ENST00000363638 102 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 U3.12-201ENST00000364498 214 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 SNORD14B-201ENST00000364533 90 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-384P-201ENST00000364900 104 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 Z98749.2-208ENST00000381646 500 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-658P-201ENST00000384606 106 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AL445189.1-201ENST00000405722 338 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-607P-201ENST00000411283 108 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 POLHP1-201ENST00000411806 470 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 CYCSP33-201ENST00000414485 327 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AL035423.1-201ENST00000420331 213 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AL353729.1-201ENST00000425044 720 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RPL26P9-201ENST00000457466 433 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AC092798.1-201ENST00000458542 409 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 SNORD105B-201ENST00000458770 79 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RN7SL542P-201ENST00000467147 294 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RPL21P13-201ENST00000488305 481 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 CYCSP39-201ENST00000565821 309 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 HMGN2P15-201ENST00000585707 270 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 BNIP3P25-201ENST00000596023 559 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 VN1R80P-201ENST00000597126 338 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AC024220.1-201ENST00000603675 484 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 AC092747.3-201ENST00000603769 301 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 RMST_4.1-201ENST00000616886 107 ntBASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RUNDC3AQ59EK9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 Y_RNA.86-201ENST00000363020 111 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-82P-201ENST00000363970 107 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 Y_RNA.303-201ENST00000364998 94 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RNA5SP219-201ENST00000390940 113 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RN7SKP111-201ENST00000410349 271 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-1148P-201ENST00000410992 104 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 GOT2P5-201ENST00000433995 546 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AL078601.1-201ENST00000444542 271 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RPL37P4-201ENST00000448908 268 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AL590639.1-201ENST00000456484 337 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC011005.2-201ENST00000487324 359 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC018710.1-201ENST00000506509 158 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC074344.1-201ENST00000512823 224 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-189P-201ENST00000516120 101 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RPL7P20-201ENST00000520308 745 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC023050.3-201ENST00000541142 333 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms