Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC023050.3-201ENST00000541142 333 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4□□□□□ -1.77
CCDC93Q567U6 BNIP3P6-201ENST00000549284 499 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 MIR3921-201ENST00000577308 85 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 MIR5047-201ENST00000579212 100 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 AC005261.5-201ENST00000596280 355 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 AL117336.2-201ENST00000602435 335 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC106900.2-201ENST00000604994 317 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 AC010133.1-201ENST00000615809 842 ntBASIC4□□□□□ -1.77
CCDC93Q567U6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4□□□□□ -1.77
CCDC93Q567U6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4□□□□□ -1.77
CCDC93Q567U6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC93Q567U6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC110774.1-201ENST00000623567 2018 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC092326.2-201ENST00000624772 1561 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 AL606923.1-201ENST00000406616 190 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 OR6C66P-201ENST00000414917 930 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC009161.1-201ENST00000417306 376 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC93Q567U6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AL357552.1-201ENST00000445254 415 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC93Q567U6 HMGN2P26-201ENST00000463169 339 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 RPL23AP11-201ENST00000475260 469 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 H3F3AP1-201ENST00000559984 334 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC93Q567U6 C8orf59P2-201ENST00000603441 271 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC009570.1-201ENST00000609599 745 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 AC090617.10-201ENST00000624308 134 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 SRP72P2-201ENST00000344851 1979 ntBASIC3.99□□□□□ -1.77
CCDC93Q567U6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC93Q567U6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC93Q567U6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC93Q567U6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 MIR449A-201ENST00000362113 91 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU6-845P-201ENST00000362578 103 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 Y_RNA.263-201ENST00000364659 114 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU4-66P-201ENST00000365199 138 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 SNORA7.4-201ENST00000384249 137 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNA5SP31-201ENST00000411144 127 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 RPS15AP6-201ENST00000420703 385 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 ELOCP23-201ENST00000452014 332 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC006539.3-201ENST00000454258 129 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 SNRPFP3-201ENST00000457792 225 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU7-180P-201ENST00000459240 63 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 RN7SL442P-201ENST00000473804 320 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC104806.1-201ENST00000508720 308 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC098591.2-201ENST00000510152 315 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AL359273.1-201ENST00000510918 627 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 MTND3P22-201ENST00000510932 243 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 SNORA70.19-201ENST00000516717 90 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 SNORD59.2-201ENST00000516873 68 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU6-711P-201ENST00000517255 106 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AP006587.4-201ENST00000526053 529 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC078814.3-201ENST00000553036 491 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 RNU6-89P-201ENST00000606519 100 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 AL136221.1-201ENST00000621449 509 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC93Q567U6 MTND4P29-201ENST00000503122 1372 ntBASIC3.98□□□□□ -1.77
CCDC93Q567U6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC93Q567U6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC93Q567U6 AC103710.2-202ENST00000641454 2853 ntBASIC3.97□□□□□ -1.77
CCDC93Q567U6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CCDC93Q567U6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC93Q567U6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC93Q567U6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC93Q567U6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC93Q567U6 FTLP6-201ENST00000355274 422 ntBASIC3.97□□□□□ -1.77
CCDC93Q567U6 RNU1-70P-201ENST00000362618 164 ntBASIC3.97□□□□□ -1.77
CCDC93Q567U6 Y_RNA.61-201ENST00000362835 102 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms