Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-667P-201ENST00000517186 102 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.91□□□□□ -2.26
CCDC58Q4VC31 AP005660.1-201ENST00000522972 293 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.91□□□□□ -2.26
CCDC58Q4VC31 AC012414.6-201ENST00000568241 401 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 CYP2C61P-201ENST00000604072 290 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 AC069304.2-201ENST00000605154 435 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 AC004492.1-201ENST00000607036 742 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 LINC00216-201ENST00000623548 1126 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 MIR4275-201ENST00000636486 87 ntBASIC0.91□□□□□ -2.26
CCDC58Q4VC31 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 RNU1-17P-201ENST00000363022 152 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 MIR525-201ENST00000384978 85 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 RNA5SP100-201ENST00000410903 110 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 RNA5SP59-201ENST00000410922 110 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AL590233.1-201ENST00000430017 456 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AL022238.1-201ENST00000442557 355 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AC093852.1-201ENST00000503587 266 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 MIR3945-201ENST00000581853 98 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 SNORD114-21-201ENST00000606412 72 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 AC091965.5-201ENST00000624785 342 ntBASIC0.9□□□□□ -2.27
CCDC58Q4VC31 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 RPL17P50-201ENST00000396131 546 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC127391.1-201ENST00000411737 98 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 LUZP4P1-201ENST00000415420 344 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 RPS27P16-201ENST00000425758 201 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 CST2P1-201ENST00000425770 87 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AL353706.1-201ENST00000436728 494 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 MTCO1P44-201ENST00000441935 243 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 PRPS1P1-201ENST00000445305 876 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 BX322784.1-201ENST00000455793 1077 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 RPL32P14-201ENST00000463196 378 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 NRON-201ENST00000517270 370 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 RPS3AP4-201ENST00000555161 764 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC136932.1-201ENST00000574771 208 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC005951.2-201ENST00000576282 495 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 BPTFP1-201ENST00000579209 492 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AL357094.1-201ENST00000603845 844 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC011939.3-201ENST00000613686 466 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC107075.1-201ENST00000613695 314 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AL159972.1-201ENST00000625150 448 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 AC241585.2-209ENST00000638217 143 ntBASIC0.89□□□□□ -2.27
CCDC58Q4VC31 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 MIR1302-8-201ENST00000408342 128 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 RPS12P24-201ENST00000412619 387 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AL353621.1-201ENST00000418219 243 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 MTND2P21-201ENST00000436242 1042 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 COX6CP18-201ENST00000448769 222 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC245102.2-201ENST00000448956 180 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 RNU7-95P-201ENST00000459222 64 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC084024.2-201ENST00000503480 791 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC091917.2-201ENST00000505002 744 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 RAB11AP2-201ENST00000545905 639 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC097468.3-201ENST00000607956 456 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC239868.4-201ENST00000608318 671 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AC017037.3-201ENST00000625016 472 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
CCDC58Q4VC31 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC58Q4VC31 ZNF849P-201ENST00000594711 1566 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC58Q4VC31 RNA5SP327-201ENST00000362494 101 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 RNU6-26P-201ENST00000383985 107 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 MTCYBP38-201ENST00000417160 1123 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 SNRPEP10-201ENST00000420249 274 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC58Q4VC31 RPS6P15-201ENST00000431996 751 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 HMGN2P18-201ENST00000450680 270 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC58Q4VC31 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC58Q4VC31 SNORA59A-201ENST00000459326 152 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 AP001025.1-201ENST00000486139 332 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms