| MUC3A | Q02505 | MIR3678-201 | ENST00000578455 | 94 nt | BASIC | 0.16 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | ASB17-201 | ENST00000284142 | 1107 nt | APPRIS P1 TSL 1 (best) BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | RNU6-349P-201 | ENST00000362402 | 107 nt | BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | RNA5SP252-201 | ENST00000391131 | 119 nt | BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | RNU4-78P-201 | ENST00000410940 | 126 nt | BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | RNU6-567P-201 | ENST00000516746 | 107 nt | BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | AP002340.1-201 | ENST00000529298 | 285 nt | TSL 3 BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | AP003049.1-201 | ENST00000529418 | 457 nt | BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | AC007038.2-201 | ENST00000608095 | 740 nt | BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | C1orf185-204 | ENST00000612209 | 899 nt | APPRIS ALT2 TSL 2 BASIC | 0.15 | □□□□□ -2.38 | | |
| MUC3A | Q02505 | CXADR-202 | ENST00000356275 | 270 nt | TSL 1 (best) BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC078857.1-201 | ENST00000469870 | 667 nt | BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC027419.2-201 | ENST00000518439 | 497 nt | TSL 3 BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC115085.1-201 | ENST00000588924 | 229 nt | BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC091925.2-201 | ENST00000625059 | 256 nt | BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC121333.1-201 | ENST00000567488 | 2709 nt | BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | PDCL2-201 | ENST00000295645 | 861 nt | APPRIS P1 TSL 1 (best) BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | LINC01052-201 | ENST00000437777 | 496 nt | TSL 3 BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AL157882.1-201 | ENST00000447148 | 429 nt | TSL 3 BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RPL23AP3-201 | ENST00000453844 | 468 nt | BASIC | 0.15 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC079140.2-201 | ENST00000506193 | 142 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNU6-782P-201 | ENST00000516852 | 104 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MIR3690-201 | ENST00000580266 | 75 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC106791.2-201 | ENST00000604680 | 391 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNA5SP108-201 | ENST00000605921 | 117 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | ANKRD36C-207 | ENST00000612359 | 650 nt | TSL 1 (best) BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AL365204.3-201 | ENST00000612448 | 685 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | OR5B3-202 | ENST00000641865 | 1046 nt | APPRIS P1 BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC009518.2-201 | ENST00000418056 | 731 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | HMGN2P16-201 | ENST00000456802 | 261 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC096577.1-203 | ENST00000506386 | 541 nt | TSL 3 BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC133963.2-201 | ENST00000513686 | 578 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | FAM60BP-201 | ENST00000578364 | 658 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC105094.2-203 | ENST00000590357 | 555 nt | TSL 4 BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | KLRF1-207 | ENST00000617793 | 1096 nt | TSL 1 (best) BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | FRG1HP-204 | ENST00000617940 | 757 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MIR6516-201 | ENST00000630554 | 81 nt | BASIC | 0.14 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MIR411-201 | ENST00000362239 | 96 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNU6-50P-201 | ENST00000362356 | 103 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | Y_RNA.203-201 | ENST00000364106 | 102 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MT-TQ-201 | ENST00000387372 | 72 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | FAR2P1-203 | ENST00000440931 | 187 nt | TSL 2 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AL592309.2-201 | ENST00000444647 | 607 nt | TSL 5 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC114912.1-201 | ENST00000503394 | 546 nt | TSL 3 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | IGKV1-22-201 | ENST00000524313 | 326 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC092071.1-201 | ENST00000597260 | 549 nt | TSL 5 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | SATB1-AS1-269 | ENST00000630766 | 591 nt | TSL 5 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNA5SP105-201 | ENST00000391123 | 113 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC009158.1-205 | ENST00000452511 | 895 nt | TSL 3 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AP005902.1-201 | ENST00000521358 | 186 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | SMARCE1P4-201 | ENST00000523647 | 241 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AP003717.3-201 | ENST00000544832 | 1180 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC090953.1-201 | ENST00000604305 | 1092 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AL021879.1-201 | ENST00000611756 | 288 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC011155.2-201 | ENST00000623202 | 216 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | CRISP3-203 | ENST00000371159 | 872 nt | APPRIS ALT2 TSL 5 BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | CCNG1P1-201 | ENST00000406783 | 885 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RPL36AP53-201 | ENST00000432891 | 316 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC098583.1-201 | ENST00000480875 | 255 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | COX7A2P2-201 | ENST00000505291 | 250 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNA5SP468-201 | ENST00000516782 | 93 nt | BASIC | 0.13 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MTND4P16-201 | ENST00000466108 | 1367 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | SNORA14A-201 | ENST00000364773 | 135 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | EFCAB14-AS1-201 | ENST00000418985 | 491 nt | TSL 3 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC010183.2-202 | ENST00000546791 | 382 nt | TSL 3 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AL158211.1-201 | ENST00000566763 | 763 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | SNORA25.3-201 | ENST00000363205 | 127 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNU6-514P-201 | ENST00000384208 | 107 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AF130351.1-202 | ENST00000400562 | 808 nt | APPRIS P5 TSL 3 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | LINC01967-202 | ENST00000437506 | 515 nt | TSL 5 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | HSPE1P21-201 | ENST00000438283 | 308 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC108752.1-203 | ENST00000496674 | 339 nt | TSL 5 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | EBAG9-207 | ENST00000531677 | 777 nt | TSL 1 (best) BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC009712.1-201 | ENST00000564938 | 316 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MIR4667-201 | ENST00000578933 | 66 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNU1-36P-201 | ENST00000365130 | 165 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | Y_RNA.375-201 | ENST00000365625 | 101 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNU2-71P-201 | ENST00000411395 | 189 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | PIGFP2-201 | ENST00000421400 | 651 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | EIF1P1-201 | ENST00000421436 | 341 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MACC1-AS1-201 | ENST00000439285 | 639 nt | TSL 3 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RPS3A-208 | ENST00000509736 | 576 nt | TSL 2 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC099520.1-208 | ENST00000518276 | 472 nt | TSL 3 BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC008739.2-201 | ENST00000597006 | 317 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC025165.5-201 | ENST00000602802 | 578 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | AC015849.6-201 | ENST00000605454 | 474 nt | BASIC | 0.12 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RGS13-204 | ENST00000543215 | 1518 nt | APPRIS P1 TSL 1 (best) BASIC | 0.11 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | DIRC1-201 | ENST00000308100 | 1037 nt | APPRIS P1 TSL 1 (best) BASIC | 0.11 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | EDNRB-AS1-201 | ENST00000422405 | 601 nt | TSL 5 BASIC | 0.11 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | LINC01473-203 | ENST00000456653 | 1079 nt | TSL 3 BASIC | 0.11 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | RPS26P55-201 | ENST00000471178 | 356 nt | BASIC | 0.11 | □□□□□ -2.39 | | |
| MUC3A | Q02505 | MTCO2P32-201 | ENST00000514865 | 403 nt | BASIC | 0.11 | □□□□□ -2.39 | | |