Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCL20P78556 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.2□□□□□ -2.22
CCL20P78556 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.2□□□□□ -2.22
CCL20P78556 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 ELOCP30-201ENST00000447108 299 ntBASIC1.2□□□□□ -2.22
CCL20P78556 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.2□□□□□ -2.22
CCL20P78556 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.2□□□□□ -2.22
CCL20P78556 RNU1-98P-201ENST00000458992 160 ntBASIC1.2□□□□□ -2.22
CCL20P78556 MTCYBP35-201ENST00000503630 1137 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 AC093752.1-206ENST00000511823 336 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AC024589.1-201ENST00000512207 263 ntBASIC1.2□□□□□ -2.22
CCL20P78556 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.2□□□□□ -2.22
CCL20P78556 RNU6-667P-201ENST00000517186 102 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 ARL2BPP2-201ENST00000550907 489 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.2□□□□□ -2.22
CCL20P78556 AL356432.3-201ENST00000568952 465 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.2□□□□□ -2.22
CCL20P78556 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.2□□□□□ -2.22
CCL20P78556 AC004987.4-201ENST00000603383 338 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AC103810.8-201ENST00000607347 118 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AC108479.2-201ENST00000617314 601 ntBASIC1.2□□□□□ -2.22
CCL20P78556 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.2□□□□□ -2.22
CCL20P78556 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCL20P78556 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCL20P78556 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.19□□□□□ -2.22
CCL20P78556 AC138393.1-203ENST00000327086 343 ntBASIC1.19□□□□□ -2.22
CCL20P78556 RNU6-289P-201ENST00000364093 107 ntBASIC1.19□□□□□ -2.22
CCL20P78556 RNU6-188P-201ENST00000364207 107 ntBASIC1.19□□□□□ -2.22
CCL20P78556 RNA5SP88-201ENST00000365560 109 ntBASIC1.19□□□□□ -2.22
CCL20P78556 RNU1-57P-201ENST00000384491 166 ntBASIC1.19□□□□□ -2.22
CCL20P78556 MTCO1P56-201ENST00000401674 224 ntBASIC1.19□□□□□ -2.22
CCL20P78556 MIR1283-2-201ENST00000408621 87 ntBASIC1.19□□□□□ -2.22
CCL20P78556 RNA5SP425-201ENST00000410336 112 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.19□□□□□ -2.22
CCL20P78556 BX510359.4-201ENST00000423750 193 ntBASIC1.19□□□□□ -2.22
CCL20P78556 HMGB1P27-201ENST00000431429 603 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.19□□□□□ -2.22
CCL20P78556 RPL7P54-201ENST00000438336 674 ntBASIC1.19□□□□□ -2.22
CCL20P78556 HSPE1P24-201ENST00000450782 238 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AC023194.1-201ENST00000493084 308 ntBASIC1.19□□□□□ -2.22
CCL20P78556 RPL23AP63-201ENST00000498752 471 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.19□□□□□ -2.22
CCL20P78556 RNU6-970P-201ENST00000516312 107 ntBASIC1.19□□□□□ -2.22
CCL20P78556 Y_RNA.675-201ENST00000516389 149 ntBASIC1.19□□□□□ -2.22
CCL20P78556 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CCL20P78556 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.19□□□□□ -2.22
CCL20P78556 OR8K2P-201ENST00000524645 927 ntBASIC1.19□□□□□ -2.22
CCL20P78556 DEFB131D-201ENST00000526803 184 ntBASIC1.19□□□□□ -2.22
CCL20P78556 CYCSP27-201ENST00000527643 293 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AL133153.1-201ENST00000557756 303 ntBASIC1.19□□□□□ -2.22
CCL20P78556 MTCYBP23-201ENST00000558717 1102 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.19□□□□□ -2.22
CCL20P78556 AL512347.1-201ENST00000566420 503 ntBASIC1.19□□□□□ -2.22
CCL20P78556 MIR4782-201ENST00000577987 79 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.19□□□□□ -2.22
CCL20P78556 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.19□□□□□ -2.22
CCL20P78556 AC021646.1-201ENST00000605469 484 ntBASIC1.19□□□□□ -2.22
CCL20P78556 AC099785.1-201ENST00000605697 437 ntBASIC1.19□□□□□ -2.22
CCL20P78556 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.19□□□□□ -2.22
CCL20P78556 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.19□□□□□ -2.22
CCL20P78556 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.19□□□□□ -2.22
CCL20P78556 AC013470.4-201ENST00000619978 986 ntBASIC1.19□□□□□ -2.22
CCL20P78556 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CCL20P78556 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCL20P78556 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.18□□□□□ -2.22
CCL20P78556 snoZ40.1-201ENST00000364540 72 ntBASIC1.18□□□□□ -2.22
CCL20P78556 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 MIR491-201ENST00000384877 84 ntBASIC1.18□□□□□ -2.22
CCL20P78556 RNA5SP465-201ENST00000391195 109 ntBASIC1.18□□□□□ -2.22
CCL20P78556 MIR934-201ENST00000401241 83 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AL359634.1-202ENST00000404721 284 ntBASIC1.18□□□□□ -2.22
CCL20P78556 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.18□□□□□ -2.22
CCL20P78556 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 TIMM9P2-201ENST00000419324 266 ntBASIC1.18□□□□□ -2.22
CCL20P78556 EIF4EP2-201ENST00000422816 654 ntBASIC1.18□□□□□ -2.22
CCL20P78556 HMGN2P3-201ENST00000433603 273 ntBASIC1.18□□□□□ -2.22
CCL20P78556 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.18□□□□□ -2.22
CCL20P78556 HMGN2P5-201ENST00000436882 273 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AL831737.1-201ENST00000441288 271 ntBASIC1.18□□□□□ -2.22
CCL20P78556 BRK1P2-201ENST00000442875 223 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 AL353705.4-201ENST00000449661 238 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.18□□□□□ -2.22
CCL20P78556 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.18□□□□□ -2.22
CCL20P78556 AC027575.1-201ENST00000481064 460 ntBASIC1.18□□□□□ -2.22
CCL20P78556 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.18□□□□□ -2.22
CCL20P78556 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 AP005597.4-201ENST00000526762 229 ntBASIC1.18□□□□□ -2.22
CCL20P78556 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.18□□□□□ -2.22
CCL20P78556 AP002770.2-201ENST00000543613 532 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.18□□□□□ -2.22
CCL20P78556 AC074050.1-201ENST00000563247 211 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC126365.2-201ENST00000580630 379 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms