Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPL5P18-201ENST00000406671 891 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 Y_RNA.623-201ENST00000411128 95 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AC023141.4-201ENST00000412031 328 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AL592148.1-201ENST00000413568 445 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AL365496.1-201ENST00000426885 215 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 RPS15AP5-201ENST00000436276 388 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.69□□□□□ -1.98
CX3CL1P78423 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 CENPBD1P1-201ENST00000464061 469 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AC128713.1-201ENST00000471495 306 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AC092989.1-201ENST00000481235 277 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 MTND3P25-201ENST00000509243 135 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC104136.1-201ENST00000512969 394 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 RNU1-86P-201ENST00000516108 154 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 RNU1-107P-201ENST00000516617 154 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AC022634.1-201ENST00000520765 532 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 MTND4P7-201ENST00000523876 130 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.69□□□□□ -1.98
CX3CL1P78423 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.69□□□□□ -1.98
CX3CL1P78423 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC012119.1-201ENST00000603184 222 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.69□□□□□ -1.98
CX3CL1P78423 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC017071.1-201ENST00000564407 2204 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CX3CL1P78423 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CX3CL1P78423 RNU6-393P-201ENST00000384475 107 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 MIR449B-201ENST00000384995 97 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AL356057.2-201ENST00000403318 432 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 MIR1277-201ENST00000408536 78 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CL1P78423 AL356968.1-201ENST00000416622 474 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AL353621.1-201ENST00000418219 243 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.68□□□□□ -1.98
CX3CL1P78423 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CL1P78423 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CL1P78423 AC009969.1-201ENST00000438726 172 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC098831.1-201ENST00000440661 216 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.68□□□□□ -1.98
CX3CL1P78423 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CL1P78423 RPL23AP11-201ENST00000475260 469 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC026801.1-201ENST00000497178 464 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 FAM92A1P2-202ENST00000504766 877 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CL1P78423 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.68□□□□□ -1.98
CX3CL1P78423 LRRC34P2-201ENST00000514850 553 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 RNU2-69P-201ENST00000516061 100 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 SNORD60.2-201ENST00000516883 86 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC245166.1-201ENST00000521012 253 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 NACAP3-201ENST00000552100 481 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CL1P78423 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CL1P78423 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CL1P78423 AC106782.4-201ENST00000568264 210 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CL1P78423 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CX3CL1P78423 AC007014.2-201ENST00000615581 479 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 U6.42-201ENST00000618440 107 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC073476.4-201ENST00000628409 72 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CX3CL1P78423 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
CX3CL1P78423 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CL1P78423 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CX3CL1P78423 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CX3CL1P78423 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 AC093536.2-201ENST00000565257 1406 ntBASIC2.68□□□□□ -1.98
CX3CL1P78423 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CL1P78423 AC091564.4-201ENST00000533934 2194 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.67□□□□□ -1.98
CX3CL1P78423 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.67□□□□□ -1.98
CX3CL1P78423 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.67□□□□□ -1.98
CX3CL1P78423 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CL1P78423 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CL1P78423 RNA5SP197-201ENST00000363357 119 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RNU6-1303P-201ENST00000364841 107 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RNU6-384P-201ENST00000364900 104 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 Y_RNA.295-201ENST00000364918 102 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RNU4-66P-201ENST00000365199 138 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RNU6-38P-201ENST00000384085 107 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 MIR514A2-201ENST00000385131 88 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 MIR514A3-201ENST00000385132 88 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RPS4XP7-201ENST00000406274 780 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RNU2-49P-201ENST00000410666 184 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 OR9R1P-201ENST00000412200 877 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CL1P78423 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CL1P78423 NDUFB1P2-201ENST00000449477 176 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 FGF7P6-202ENST00000451282 293 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 CYCSP35-201ENST00000451978 304 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RNU6-333P-201ENST00000459117 107 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms