Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.03□□□□□ -2.08
EIF3EP60228 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 RNA5SP137-201ENST00000516833 135 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.03□□□□□ -2.08
EIF3EP60228 AC105185.1-201ENST00000518705 535 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.03□□□□□ -2.08
EIF3EP60228 AP006587.4-201ENST00000526053 529 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 FAM92A1P1-201ENST00000528023 890 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 AC068587.4-201ENST00000533893 186 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.03□□□□□ -2.08
EIF3EP60228 AC012435.1-202ENST00000568772 240 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 NRBF2P1-201ENST00000587407 859 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.03□□□□□ -2.08
EIF3EP60228 SNRPGP19-201ENST00000603826 189 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 AC005034.5-201ENST00000604219 466 ntBASIC2.03□□□□□ -2.08
EIF3EP60228 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.03□□□□□ -2.08
EIF3EP60228 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
EIF3EP60228 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
EIF3EP60228 Z75746.1-201ENST00000440243 2080 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
EIF3EP60228 RNU6-1159P-201ENST00000362933 107 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 RNU6-906P-201ENST00000384700 70 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 NDUFS5P1-201ENST00000405668 289 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 RNA5SP425-201ENST00000410336 112 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.02□□□□□ -2.09
EIF3EP60228 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.02□□□□□ -2.09
EIF3EP60228 AC104651.1-201ENST00000427559 735 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.02□□□□□ -2.09
EIF3EP60228 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.02□□□□□ -2.09
EIF3EP60228 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.02□□□□□ -2.09
EIF3EP60228 RPL7P36-201ENST00000444633 681 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AL353705.4-201ENST00000449661 238 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 PMCHL2-203ENST00000457791 237 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 UBE2V1P12-201ENST00000503954 474 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AP000907.2-201ENST00000530827 353 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AP004247.1-201ENST00000531556 1289 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
EIF3EP60228 DUXAP1-201ENST00000556632 463 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.02□□□□□ -2.09
EIF3EP60228 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.02□□□□□ -2.09
EIF3EP60228 AC073544.2-201ENST00000601155 540 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.02□□□□□ -2.09
EIF3EP60228 AC009233.1-201ENST00000616477 371 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AL590808.1-201ENST00000618696 141 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 DUXAP9-208ENST00000622815 614 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 AC091953.2-201ENST00000623979 160 ntBASIC2.02□□□□□ -2.09
EIF3EP60228 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
EIF3EP60228 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
EIF3EP60228 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
EIF3EP60228 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
EIF3EP60228 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF3EP60228 ZNF29P-201ENST00000225587 168 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.01□□□□□ -2.09
EIF3EP60228 VPS26BP1-201ENST00000417155 755 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AC097463.2-201ENST00000421074 142 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AL139413.1-201ENST00000421309 217 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 DPH3P2-201ENST00000422618 250 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.01□□□□□ -2.09
EIF3EP60228 RPL7P34-201ENST00000433316 712 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF3EP60228 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.01□□□□□ -2.09
EIF3EP60228 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.01□□□□□ -2.09
EIF3EP60228 RPL23AP41-201ENST00000484754 458 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 MTAPP1-201ENST00000489154 819 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AC008549.1-201ENST00000512900 643 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 SMURF2P1-201ENST00000514992 481 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.01□□□□□ -2.09
EIF3EP60228 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.01□□□□□ -2.09
EIF3EP60228 AC013828.2-201ENST00000532487 235 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 RPS3AP4-201ENST00000555161 764 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF3EP60228 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF3EP60228 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.01□□□□□ -2.09
EIF3EP60228 AC005296.1-201ENST00000616145 209 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
EIF3EP60228 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
EIF3EP60228 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AC091965.5-201ENST00000624785 342 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 AC010608.3-201ENST00000625048 527 ntBASIC2.01□□□□□ -2.09
EIF3EP60228 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
EIF3EP60228 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
EIF3EP60228 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
EIF3EP60228 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EIF3EP60228 RNA5SP88-201ENST00000365560 109 ntBASIC2□□□□□ -2.09
EIF3EP60228 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2□□□□□ -2.09
EIF3EP60228 RNU6-157P-201ENST00000383957 107 ntBASIC2□□□□□ -2.09
EIF3EP60228 RNU2-2P-201ENST00000410396 191 ntBASIC2□□□□□ -2.09
EIF3EP60228 RNA5SP508-201ENST00000411327 119 ntBASIC2□□□□□ -2.09
EIF3EP60228 AC078974.1-201ENST00000411597 223 ntBASIC2□□□□□ -2.09
EIF3EP60228 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2□□□□□ -2.09
EIF3EP60228 HMGB1P27-201ENST00000431429 603 ntBASIC2□□□□□ -2.09
EIF3EP60228 AL139415.2-201ENST00000431968 163 ntBASIC2□□□□□ -2.09
EIF3EP60228 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2□□□□□ -2.09
EIF3EP60228 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms