Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL670379.10-201ENST00000604330 253 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AC010900.2-201ENST00000604508 210 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AC008162.1-201ENST00000604718 254 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.1-201ENST00000604752 252 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.2-201ENST00000604983 252 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.5-201ENST00000605253 252 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.4-201ENST00000605279 254 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.12-201ENST00000605291 253 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.8-201ENST00000605353 252 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.9-201ENST00000605428 253 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AL670379.7-201ENST00000605823 252 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AC034229.4-201ENST00000607861 441 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 AC087241.4-201ENST00000612441 480 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 MIR6134-201ENST00000617606 109 ntBASIC1.28□□□□□ -2.2
AP3S2P59780 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
AP3S2P59780 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
AP3S2P59780 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.27□□□□□ -2.21
AP3S2P59780 AC006026.1-201ENST00000444025 1803 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 ZNF29P-201ENST00000225587 168 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 RNU6-343P-201ENST00000364709 104 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 RNU6-1032P-201ENST00000384100 107 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 RNU6-1207P-201ENST00000384343 107 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 SNORD14D-201ENST00000384390 87 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 MIR597-201ENST00000384968 97 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 MIR483-201ENST00000385070 76 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 UBE2V1P15-201ENST00000407776 448 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.27□□□□□ -2.21
AP3S2P59780 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.27□□□□□ -2.21
AP3S2P59780 AC244035.1-201ENST00000430042 390 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.27□□□□□ -2.21
AP3S2P59780 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.27□□□□□ -2.21
AP3S2P59780 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.27□□□□□ -2.21
AP3S2P59780 RNU6-1183P-201ENST00000517054 60 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.27□□□□□ -2.21
AP3S2P59780 AP005660.1-201ENST00000522972 293 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.27□□□□□ -2.21
AP3S2P59780 AP000763.2-201ENST00000540641 163 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
AP3S2P59780 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.27□□□□□ -2.21
AP3S2P59780 AL160281.1-201ENST00000605307 311 ntBASIC1.27□□□□□ -2.21
AP3S2P59780 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.27□□□□□ -2.21
AP3S2P59780 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
AP3S2P59780 OR5T3-201ENST00000303059 1023 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 AL161781.1-201ENST00000354277 403 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
AP3S2P59780 RNU2-36P-201ENST00000410361 191 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 RN7SKP223-201ENST00000410582 62 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 RN7SKP284-201ENST00000411002 343 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.26□□□□□ -2.21
AP3S2P59780 MTND2P20-201ENST00000440805 661 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.26□□□□□ -2.21
AP3S2P59780 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.26□□□□□ -2.21
AP3S2P59780 AL590365.1-201ENST00000450788 243 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
AP3S2P59780 AC109927.2-201ENST00000506416 303 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 AC116655.1-201ENST00000508324 901 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 RNU5B-3P-201ENST00000516601 115 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.26□□□□□ -2.21
AP3S2P59780 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.26□□□□□ -2.21
AP3S2P59780 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.26□□□□□ -2.21
AP3S2P59780 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
AP3S2P59780 AL353997.4-201ENST00000586196 166 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
AP3S2P59780 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.26□□□□□ -2.21
AP3S2P59780 AC091965.5-201ENST00000624785 342 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 AC110994.2-201ENST00000635481 492 ntBASIC1.26□□□□□ -2.21
AP3S2P59780 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
AP3S2P59780 MTND4P23-201ENST00000447723 1363 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 MIR583-201ENST00000384846 75 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
AP3S2P59780 MIR1262-201ENST00000408276 93 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 RNU6-1140P-201ENST00000410517 106 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AL139415.2-201ENST00000431968 163 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AL121601.2-201ENST00000438019 707 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.25□□□□□ -2.21
AP3S2P59780 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.25□□□□□ -2.21
AP3S2P59780 AMD1P1-201ENST00000457220 922 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
AP3S2P59780 RPS15AP36-201ENST00000492022 382 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AC104564.1-201ENST00000493028 407 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.25□□□□□ -2.21
AP3S2P59780 MTCYBP35-201ENST00000503630 1137 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.25□□□□□ -2.21
AP3S2P59780 SNORA26.10-201ENST00000516427 141 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.25□□□□□ -2.21
AP3S2P59780 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.25□□□□□ -2.21
AP3S2P59780 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
AP3S2P59780 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.25□□□□□ -2.21
AP3S2P59780 MIR4255-201ENST00000579351 72 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.25□□□□□ -2.21
AP3S2P59780 RPL30P11-203ENST00000598995 310 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.25□□□□□ -2.21
AP3S2P59780 BBIP1P1-201ENST00000602999 279 ntBASIC1.25□□□□□ -2.21
AP3S2P59780 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.25□□□□□ -2.21
AP3S2P59780 RMST_6.1-201ENST00000611980 203 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms