Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.91□□□□□ -2.1
CLDN6P56747 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN6P56747 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.9□□□□□ -2.1
CLDN6P56747 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN6P56747 NACAP2-201ENST00000318548 624 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 RNA5SP190-201ENST00000365222 118 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 SNORD116.1-201ENST00000365628 92 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 RN7SKP266-201ENST00000410232 287 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 MTATP6P20-201ENST00000414147 562 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 BTF3P4-201ENST00000418852 495 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 RPS3AP37-201ENST00000419176 745 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 OR6C5P-201ENST00000452388 923 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
CLDN6P56747 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.9□□□□□ -2.11
CLDN6P56747 MTAPP1-201ENST00000489154 819 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 AF213884.2-201ENST00000510417 903 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 SMURF2P1-201ENST00000514992 481 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 RNU6-64P-201ENST00000517119 105 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLDN6P56747 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.9□□□□□ -2.11
CLDN6P56747 ISCA1P3-201ENST00000577104 373 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.9□□□□□ -2.11
CLDN6P56747 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.9□□□□□ -2.11
CLDN6P56747 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN6P56747 BNIP3P31-201ENST00000604515 566 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 AC009090.3-201ENST00000616553 565 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 AL109620.1-201ENST00000618738 1197 ntBASIC1.9□□□□□ -2.11
CLDN6P56747 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLDN6P56747 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
CLDN6P56747 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN6P56747 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLDN6P56747 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.89□□□□□ -2.11
CLDN6P56747 MIR378A-201ENST00000362177 66 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 RNU6-462P-201ENST00000362659 105 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.89□□□□□ -2.11
CLDN6P56747 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN6P56747 MTND1P23-201ENST00000416931 372 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN6P56747 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN6P56747 AL117351.1-201ENST00000438864 766 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN6P56747 AC092001.1-201ENST00000453012 261 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC109486.1-201ENST00000486833 374 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC104564.1-201ENST00000493028 407 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 RPL22P13-201ENST00000493291 347 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC010587.2-201ENST00000511727 448 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 SNORA25.11-201ENST00000515935 105 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CLDN6P56747 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.89□□□□□ -2.11
CLDN6P56747 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.89□□□□□ -2.11
CLDN6P56747 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.89□□□□□ -2.11
CLDN6P56747 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.89□□□□□ -2.11
CLDN6P56747 MTND3P19-201ENST00000603825 345 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AL138963.2-201ENST00000605137 226 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AL121917.1-203ENST00000605534 577 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC068276.1-201ENST00000605793 379 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 snoU13.31-201ENST00000607291 104 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC024581.2-201ENST00000619986 252 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC244517.12-201ENST00000623581 663 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AL136313.1-201ENST00000624804 202 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC099786.3-201ENST00000565735 1410 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.89□□□□□ -2.11
CLDN6P56747 AC092125.1-201ENST00000562568 1995 ntBASIC1.89□□□□□ -2.11
CLDN6P56747 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLDN6P56747 RNU6-661P-201ENST00000362409 107 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 RNU5E-10P-201ENST00000363506 118 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN6P56747 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN6P56747 SNORA48.3-201ENST00000391081 134 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 NDUFS5P1-201ENST00000405668 289 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 RNU2-63P-201ENST00000410792 194 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 USP9YP6-201ENST00000413550 854 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 Z82205.1-201ENST00000428456 297 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 AC004383.1-201ENST00000438135 289 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 SDR42E1P3-201ENST00000438345 502 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.88□□□□□ -2.11
CLDN6P56747 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CLDN6P56747 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 RPF2P2-201ENST00000504693 896 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 MRPS33P3-201ENST00000513456 322 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 RNU6-581P-201ENST00000516214 105 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN6P56747 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN6P56747 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.88□□□□□ -2.11
CLDN6P56747 AC023813.2-201ENST00000564321 469 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC090079.2-201ENST00000575289 768 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 MIR5002-201ENST00000584713 97 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms