Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 FO393413.1-201ENST00000402892 195 ntBASIC2.27□□□□□ -2.05
LIM2P55344 RNA5SP492-201ENST00000411330 114 ntBASIC2.27□□□□□ -2.05
LIM2P55344 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AL353729.1-201ENST00000425044 720 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.27□□□□□ -2.05
LIM2P55344 MTATP6P17-201ENST00000431030 672 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AL591212.2-201ENST00000433923 257 ntBASIC2.27□□□□□ -2.05
LIM2P55344 OSTCP8-201ENST00000445117 448 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AL513328.1-201ENST00000446460 224 ntBASIC2.27□□□□□ -2.05
LIM2P55344 HMGN2P10-201ENST00000448085 265 ntBASIC2.27□□□□□ -2.05
LIM2P55344 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LIM2P55344 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.27□□□□□ -2.05
LIM2P55344 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.27□□□□□ -2.05
LIM2P55344 AC098799.2-201ENST00000509466 868 ntBASIC2.27□□□□□ -2.05
LIM2P55344 RNA5SP402-201ENST00000517148 110 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AP001646.1-201ENST00000527936 915 ntBASIC2.27□□□□□ -2.05
LIM2P55344 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LIM2P55344 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.27□□□□□ -2.05
LIM2P55344 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.27□□□□□ -2.05
LIM2P55344 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.27□□□□□ -2.05
LIM2P55344 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.27□□□□□ -2.05
LIM2P55344 AL590229.1-201ENST00000603497 542 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AC025811.1-201ENST00000604312 472 ntBASIC2.27□□□□□ -2.05
LIM2P55344 MTND4LP5-201ENST00000605152 292 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AC022893.3-201ENST00000607665 437 ntBASIC2.27□□□□□ -2.05
LIM2P55344 AC109347.2-201ENST00000610220 349 ntBASIC2.27□□□□□ -2.05
LIM2P55344 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
LIM2P55344 MIR3199-2-201ENST00000636243 86 ntBASIC2.27□□□□□ -2.05
LIM2P55344 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LIM2P55344 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
LIM2P55344 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.27□□□□□ -2.05
LIM2P55344 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIM2P55344 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LIM2P55344 MIR627-201ENST00000384979 97 ntBASIC2.26□□□□□ -2.05
LIM2P55344 RNU6-387P-201ENST00000411331 105 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.26□□□□□ -2.05
LIM2P55344 USP9YP6-201ENST00000413550 854 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.26□□□□□ -2.05
LIM2P55344 RPL7P10-201ENST00000417407 739 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.26□□□□□ -2.05
LIM2P55344 AL592045.1-201ENST00000429867 352 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.26□□□□□ -2.05
LIM2P55344 AC009961.2-201ENST00000435771 251 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.26□□□□□ -2.05
LIM2P55344 SNRPGP9-201ENST00000456025 225 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC107626.1-201ENST00000471084 183 ntBASIC2.26□□□□□ -2.05
LIM2P55344 TRBV1-201ENST00000476502 284 ntBASIC2.26□□□□□ -2.05
LIM2P55344 RAP1BP2-201ENST00000478270 544 ntBASIC2.26□□□□□ -2.05
LIM2P55344 BET1P1-201ENST00000482276 359 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC087190.1-201ENST00000484462 480 ntBASIC2.26□□□□□ -2.05
LIM2P55344 RPS15AP34-201ENST00000487776 387 ntBASIC2.26□□□□□ -2.05
LIM2P55344 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.26□□□□□ -2.05
LIM2P55344 AC109927.2-201ENST00000506416 303 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
LIM2P55344 Vault.3-201ENST00000516676 95 ntBASIC2.26□□□□□ -2.05
LIM2P55344 RNU6-914P-201ENST00000516749 109 ntBASIC2.26□□□□□ -2.05
LIM2P55344 RNU2-46P-201ENST00000517038 113 ntBASIC2.26□□□□□ -2.05
LIM2P55344 RNU6-1315P-201ENST00000517187 99 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
LIM2P55344 HSPE1P20-201ENST00000538133 289 ntBASIC2.26□□□□□ -2.05
LIM2P55344 GLYCAM1-201ENST00000546596 285 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.26□□□□□ -2.05
LIM2P55344 AC007151.1-201ENST00000572774 483 ntBASIC2.26□□□□□ -2.05
LIM2P55344 MIR3616-201ENST00000584070 92 ntBASIC2.26□□□□□ -2.05
LIM2P55344 MIR548AB-201ENST00000584917 84 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC135507.1-201ENST00000607214 561 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AL359547.2-201ENST00000615810 418 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AC138649.3-201ENST00000622154 254 ntBASIC2.26□□□□□ -2.05
LIM2P55344 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.26□□□□□ -2.05
LIM2P55344 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.25□□□□□ -2.05
LIM2P55344 U8.3-201ENST00000363321 132 ntBASIC2.25□□□□□ -2.05
LIM2P55344 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LIM2P55344 RPL21P75-201ENST00000396599 483 ntBASIC2.25□□□□□ -2.05
LIM2P55344 RPL21P28-201ENST00000401418 483 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AL592114.1-201ENST00000403842 483 ntBASIC2.25□□□□□ -2.05
LIM2P55344 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.25□□□□□ -2.05
LIM2P55344 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.25□□□□□ -2.05
LIM2P55344 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.25□□□□□ -2.05
LIM2P55344 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.25□□□□□ -2.05
LIM2P55344 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.25□□□□□ -2.05
LIM2P55344 RPL21P39-201ENST00000463605 483 ntBASIC2.25□□□□□ -2.05
LIM2P55344 RPL21P93-201ENST00000480465 489 ntBASIC2.25□□□□□ -2.05
LIM2P55344 RPS29P20-201ENST00000489592 171 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC093591.1-201ENST00000491435 481 ntBASIC2.25□□□□□ -2.05
LIM2P55344 RPL21P16-201ENST00000495531 483 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.25□□□□□ -2.05
LIM2P55344 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LIM2P55344 AC098591.2-201ENST00000510152 315 ntBASIC2.25□□□□□ -2.05
LIM2P55344 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.25□□□□□ -2.05
LIM2P55344 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.25□□□□□ -2.05
LIM2P55344 AC022616.3-201ENST00000523940 148 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.25□□□□□ -2.05
LIM2P55344 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.25□□□□□ -2.05
LIM2P55344 AC021739.1-201ENST00000559631 174 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.25□□□□□ -2.05
LIM2P55344 MIR1273C-201ENST00000578669 77 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms