Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL138976.2-201ENST00000563989 694 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 MTCO3P24-201ENST00000572729 782 ntBASIC2.83□□□□□ -1.96
CDH11P55287 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
CDH11P55287 MIR4424-201ENST00000585257 86 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 AL162413.1-201ENST00000603198 110 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AC107294.1-201ENST00000609524 467 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AL162274.2-201ENST00000614406 332 ntBASIC2.83□□□□□ -1.96
CDH11P55287 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 AC010338.1-201ENST00000621823 717 ntBASIC2.83□□□□□ -1.96
CDH11P55287 FER-210ENST00000628534 558 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH11P55287 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH11P55287 HSPA8P4-201ENST00000511877 1920 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AL354685.2-201ENST00000448218 1447 ntBASIC2.83□□□□□ -1.96
CDH11P55287 CKAP2P1-201ENST00000555477 2049 ntBASIC2.83□□□□□ -1.96
CDH11P55287 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH11P55287 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH11P55287 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
CDH11P55287 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH11P55287 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDH11P55287 Y_RNA.245-201ENST00000364493 95 ntBASIC2.82□□□□□ -1.96
CDH11P55287 Y_RNA.248-201ENST00000364501 109 ntBASIC2.82□□□□□ -1.96
CDH11P55287 RNU6-534P-201ENST00000364877 106 ntBASIC2.82□□□□□ -1.96
CDH11P55287 RNU6-1283P-201ENST00000365314 105 ntBASIC2.82□□□□□ -1.96
CDH11P55287 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
CDH11P55287 SNORA48.2-201ENST00000390926 124 ntBASIC2.82□□□□□ -1.96
CDH11P55287 RPS4XP3-201ENST00000398541 413 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AL354719.1-201ENST00000406535 843 ntBASIC2.82□□□□□ -1.96
CDH11P55287 RNU4-47P-201ENST00000410876 114 ntBASIC2.82□□□□□ -1.96
CDH11P55287 OR6C66P-201ENST00000414917 930 ntBASIC2.82□□□□□ -1.96
CDH11P55287 USP9YP27-201ENST00000418455 438 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AL592045.1-201ENST00000429867 352 ntBASIC2.82□□□□□ -1.96
CDH11P55287 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 GTF2IP20-201ENST00000431663 360 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AL512844.2-201ENST00000433990 593 ntBASIC2.82□□□□□ -1.96
CDH11P55287 RBMX2P4-201ENST00000441256 376 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AL671855.1-201ENST00000446875 1203 ntBASIC2.82□□□□□ -1.96
CDH11P55287 DPPA3P1-201ENST00000448050 469 ntBASIC2.82□□□□□ -1.96
CDH11P55287 FABP5P13-201ENST00000452144 328 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH11P55287 AC009901.1-201ENST00000506703 541 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 AP003122.3-201ENST00000526316 255 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AC084851.1-201ENST00000529105 249 ntBASIC2.82□□□□□ -1.96
CDH11P55287 ADI1P3-201ENST00000549509 470 ntBASIC2.82□□□□□ -1.96
CDH11P55287 MIR2682-201ENST00000580305 110 ntBASIC2.82□□□□□ -1.96
CDH11P55287 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH11P55287 MIR4325-201ENST00000583049 90 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH11P55287 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.82□□□□□ -1.96
CDH11P55287 YWHAEP7-203ENST00000622054 312 ntBASIC2.82□□□□□ -1.96
CDH11P55287 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH11P55287 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH11P55287 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH11P55287 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.82□□□□□ -1.96
CDH11P55287 AL359693.1-201ENST00000614959 2407 ntBASIC2.82□□□□□ -1.96
CDH11P55287 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH11P55287 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH11P55287 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH11P55287 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH11P55287 AC022336.2-201ENST00000568966 2538 ntBASIC2.81□□□□□ -1.96
CDH11P55287 MAPK10-322ENST00000641485 4530 ntBASIC2.81□□□□□ -1.96
CDH11P55287 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH11P55287 FTLP6-201ENST00000355274 422 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNU6-451P-201ENST00000362921 107 ntBASIC2.81□□□□□ -1.96
CDH11P55287 Y_RNA.89-201ENST00000363031 102 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNY3P3-201ENST00000363816 102 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNU6-371P-201ENST00000364283 108 ntBASIC2.81□□□□□ -1.96
CDH11P55287 SNORA1.3-201ENST00000384676 136 ntBASIC2.81□□□□□ -1.96
CDH11P55287 SNORA48.5-201ENST00000391143 135 ntBASIC2.81□□□□□ -1.96
CDH11P55287 MIR1277-201ENST00000408536 78 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNA5SP344-201ENST00000411081 104 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH11P55287 AC080125.1-201ENST00000414888 684 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH11P55287 TMEM167AP1-201ENST00000423409 219 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AL160275.3-201ENST00000423876 471 ntBASIC2.81□□□□□ -1.96
CDH11P55287 CALM2P2-201ENST00000428512 440 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH11P55287 MTND4P25-201ENST00000441039 533 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AL590664.1-201ENST00000448065 339 ntBASIC2.81□□□□□ -1.96
CDH11P55287 CECR9-201ENST00000453421 199 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNU7-180P-201ENST00000459240 63 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RN7SL863P-201ENST00000462370 296 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNA5SP401-201ENST00000515920 127 ntBASIC2.81□□□□□ -1.96
CDH11P55287 RNA5SP290-201ENST00000517133 127 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.81□□□□□ -1.96
CDH11P55287 HIF1AP1-201ENST00000553642 175 ntBASIC2.81□□□□□ -1.96
CDH11P55287 HMGB1P14-201ENST00000557424 591 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AC092325.1-201ENST00000566449 554 ntBASIC2.81□□□□□ -1.96
CDH11P55287 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms