Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.84□□□□□ -1.95
PDX1P52945 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.84□□□□□ -1.95
PDX1P52945 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.84□□□□□ -1.95
PDX1P52945 AC079600.2-201ENST00000550076 130 ntBASIC2.84□□□□□ -1.95
PDX1P52945 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.84□□□□□ -1.95
PDX1P52945 AC116312.1-201ENST00000606841 314 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AP001596.2-201ENST00000608410 312 ntBASIC2.84□□□□□ -1.95
PDX1P52945 FTX_3.1-201ENST00000610451 147 ntBASIC2.84□□□□□ -1.95
PDX1P52945 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDX1P52945 AC073534.2-201ENST00000620377 381 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.84□□□□□ -1.95
PDX1P52945 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.84□□□□□ -1.95
PDX1P52945 AL512643.1-201ENST00000635735 524 ntBASIC2.84□□□□□ -1.95
PDX1P52945 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PDX1P52945 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.84□□□□□ -1.96
PDX1P52945 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.83□□□□□ -1.96
PDX1P52945 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PDX1P52945 MAPK10-362ENST00000641864 4484 ntBASIC2.83□□□□□ -1.96
PDX1P52945 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PDX1P52945 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDX1P52945 SNORA4.3-201ENST00000365564 137 ntBASIC2.83□□□□□ -1.96
PDX1P52945 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.83□□□□□ -1.96
PDX1P52945 RNU6-606P-201ENST00000384721 111 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.83□□□□□ -1.96
PDX1P52945 OR51A5P-201ENST00000415429 942 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.83□□□□□ -1.96
PDX1P52945 SNRPEP9-201ENST00000436794 238 ntBASIC2.83□□□□□ -1.96
PDX1P52945 MTND1P34-201ENST00000438556 671 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.83□□□□□ -1.96
PDX1P52945 PSPHP1-201ENST00000450062 261 ntBASIC2.83□□□□□ -1.96
PDX1P52945 CACYBPP2-201ENST00000453625 678 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.83□□□□□ -1.96
PDX1P52945 snoU13.28-201ENST00000459235 104 ntBASIC2.83□□□□□ -1.96
PDX1P52945 RPL37P6-201ENST00000460682 294 ntBASIC2.83□□□□□ -1.96
PDX1P52945 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.83□□□□□ -1.96
PDX1P52945 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.83□□□□□ -1.96
PDX1P52945 AC139453.3-201ENST00000493276 369 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC109927.2-201ENST00000506416 303 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC009646.1-201ENST00000510455 318 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC010265.1-201ENST00000513509 211 ntBASIC2.83□□□□□ -1.96
PDX1P52945 RNU6-685P-201ENST00000517088 95 ntBASIC2.83□□□□□ -1.96
PDX1P52945 RNU6-711P-201ENST00000517255 106 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AP003122.3-201ENST00000526316 255 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC084851.1-201ENST00000529105 249 ntBASIC2.83□□□□□ -1.96
PDX1P52945 OR5BN1P-201ENST00000532955 829 ntBASIC2.83□□□□□ -1.96
PDX1P52945 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDX1P52945 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDX1P52945 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.83□□□□□ -1.96
PDX1P52945 HMGB1P14-201ENST00000557424 591 ntBASIC2.83□□□□□ -1.96
PDX1P52945 MTATP6P3-201ENST00000581686 676 ntBASIC2.83□□□□□ -1.96
PDX1P52945 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.83□□□□□ -1.96
PDX1P52945 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.83□□□□□ -1.96
PDX1P52945 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.83□□□□□ -1.96
PDX1P52945 NRBF2P5-201ENST00000603087 788 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC080078.2-201ENST00000603766 501 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AP001330.5-201ENST00000607176 411 ntBASIC2.83□□□□□ -1.96
PDX1P52945 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.83□□□□□ -1.96
PDX1P52945 AC017083.3-201ENST00000609955 700 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AP001486.3-201ENST00000615334 372 ntBASIC2.83□□□□□ -1.96
PDX1P52945 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
PDX1P52945 AC073308.1-201ENST00000623696 305 ntBASIC2.83□□□□□ -1.96
PDX1P52945 CR381653.2-201ENST00000624041 768 ntBASIC2.83□□□□□ -1.96
PDX1P52945 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDX1P52945 CKAP2P1-201ENST00000555477 2049 ntBASIC2.83□□□□□ -1.96
PDX1P52945 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDX1P52945 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PDX1P52945 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.82□□□□□ -1.96
PDX1P52945 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
PDX1P52945 SNORA75B-201ENST00000384053 137 ntBASIC2.82□□□□□ -1.96
PDX1P52945 Y_RNA.554-201ENST00000384672 102 ntBASIC2.82□□□□□ -1.96
PDX1P52945 MIR548F1-201ENST00000408667 84 ntBASIC2.82□□□□□ -1.96
PDX1P52945 Y_RNA.599-201ENST00000410489 109 ntBASIC2.82□□□□□ -1.96
PDX1P52945 Y_RNA.619-201ENST00000410951 90 ntBASIC2.82□□□□□ -1.96
PDX1P52945 RNA5SP184-201ENST00000411071 108 ntBASIC2.82□□□□□ -1.96
PDX1P52945 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.82□□□□□ -1.96
PDX1P52945 EEF1A1P40-201ENST00000412883 573 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 AC080125.1-201ENST00000414888 684 ntBASIC2.82□□□□□ -1.96
PDX1P52945 MRPL50P2-201ENST00000416821 482 ntBASIC2.82□□□□□ -1.96
PDX1P52945 ZNF885P-201ENST00000420174 1098 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 MTCO3P30-201ENST00000426425 670 ntBASIC2.82□□□□□ -1.96
PDX1P52945 CALM2P2-201ENST00000428512 440 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL606489.2-201ENST00000433886 234 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.82□□□□□ -1.96
PDX1P52945 MTND1P4-201ENST00000435196 415 ntBASIC2.82□□□□□ -1.96
PDX1P52945 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.82□□□□□ -1.96
PDX1P52945 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PDX1P52945 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.82□□□□□ -1.96
PDX1P52945 AL118520.1-201ENST00000450770 291 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.82□□□□□ -1.96
PDX1P52945 RNU7-182P-201ENST00000459009 62 ntBASIC2.82□□□□□ -1.96
PDX1P52945 SRRM1P2-201ENST00000464531 1192 ntBASIC2.82□□□□□ -1.96
PDX1P52945 RN7SL283P-201ENST00000489055 303 ntBASIC2.82□□□□□ -1.96
PDX1P52945 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 AC104806.1-201ENST00000508720 308 ntBASIC2.82□□□□□ -1.96
PDX1P52945 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms