Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TRBV12-1-201ENST00000479785 344 ntBASIC2.56□□□□□ -2
SMSP52788 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMSP52788 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.56□□□□□ -2
SMSP52788 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.56□□□□□ -2
SMSP52788 RNU2-46P-201ENST00000517038 113 ntBASIC2.56□□□□□ -2
SMSP52788 AL157871.3-201ENST00000557231 293 ntBASIC2.56□□□□□ -2
SMSP52788 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMSP52788 MIR3682-201ENST00000581338 84 ntBASIC2.56□□□□□ -2
SMSP52788 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
SMSP52788 AC005261.5-201ENST00000596280 355 ntBASIC2.56□□□□□ -2
SMSP52788 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
SMSP52788 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.56□□□□□ -2
SMSP52788 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
SMSP52788 AL022154.1-201ENST00000604698 785 ntBASIC2.56□□□□□ -2
SMSP52788 MIR15A-201ENST00000607334 83 ntBASIC2.56□□□□□ -2
SMSP52788 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
SMSP52788 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMSP52788 AC130324.3-201ENST00000614165 542 ntBASIC2.56□□□□□ -2
SMSP52788 AC120349.3-201ENST00000624377 529 ntBASIC2.56□□□□□ -2
SMSP52788 AC025048.6-202ENST00000627667 438 ntBASIC2.56□□□□□ -2
SMSP52788 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMSP52788 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMSP52788 AL355596.1-201ENST00000565399 3996 ntBASIC2.55□□□□□ -2
SMSP52788 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SMSP52788 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SMSP52788 RNU6-859P-201ENST00000362728 107 ntBASIC2.55□□□□□ -2
SMSP52788 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMSP52788 RPS3AP3-201ENST00000411933 242 ntBASIC2.55□□□□□ -2
SMSP52788 OR51A5P-201ENST00000415429 942 ntBASIC2.55□□□□□ -2
SMSP52788 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.55□□□□□ -2
SMSP52788 ELOCP4-201ENST00000420090 333 ntBASIC2.55□□□□□ -2
SMSP52788 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
SMSP52788 MYL8P-204ENST00000431574 518 ntBASIC2.55□□□□□ -2
SMSP52788 RPL23AP30-201ENST00000432419 501 ntBASIC2.55□□□□□ -2
SMSP52788 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.55□□□□□ -2
SMSP52788 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.55□□□□□ -2
SMSP52788 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
SMSP52788 AC126389.1-201ENST00000477436 290 ntBASIC2.55□□□□□ -2
SMSP52788 RAP1BP2-201ENST00000478270 544 ntBASIC2.55□□□□□ -2
SMSP52788 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.55□□□□□ -2
SMSP52788 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.55□□□□□ -2
SMSP52788 AC098862.1-201ENST00000504991 413 ntBASIC2.55□□□□□ -2
SMSP52788 AC117522.3-201ENST00000507974 584 ntBASIC2.55□□□□□ -2
SMSP52788 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
SMSP52788 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
SMSP52788 AC025755.1-201ENST00000521306 278 ntBASIC2.55□□□□□ -2
SMSP52788 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.55□□□□□ -2
SMSP52788 OR5B19P-201ENST00000531766 928 ntBASIC2.55□□□□□ -2
SMSP52788 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.55□□□□□ -2
SMSP52788 LINC00933-203ENST00000559812 219 ntBASIC2.55□□□□□ -2
SMSP52788 AL158211.1-201ENST00000566763 763 ntBASIC2.55□□□□□ -2
SMSP52788 MIR4782-201ENST00000577987 79 ntBASIC2.55□□□□□ -2
SMSP52788 MIR548AB-201ENST00000584917 84 ntBASIC2.55□□□□□ -2
SMSP52788 ZNF861P-201ENST00000588126 639 ntBASIC2.55□□□□□ -2
SMSP52788 AC073544.2-201ENST00000601155 540 ntBASIC2.55□□□□□ -2
SMSP52788 AL359547.2-201ENST00000615810 418 ntBASIC2.55□□□□□ -2
SMSP52788 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.55□□□□□ -2
SMSP52788 CR381653.2-201ENST00000624041 768 ntBASIC2.55□□□□□ -2
SMSP52788 AC092608.2-201ENST00000624427 218 ntBASIC2.55□□□□□ -2
SMSP52788 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
SMSP52788 U6.99-201ENST00000637524 83 ntBASIC2.55□□□□□ -2
SMSP52788 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SMSP52788 AC103710.2-202ENST00000641454 2853 ntBASIC2.55□□□□□ -2
SMSP52788 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.54□□□□□ -2
SMSP52788 U8.3-201ENST00000363321 132 ntBASIC2.54□□□□□ -2
SMSP52788 RNU6-395P-201ENST00000365662 106 ntBASIC2.54□□□□□ -2
SMSP52788 RNU6-39P-201ENST00000384344 107 ntBASIC2.54□□□□□ -2
SMSP52788 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
SMSP52788 MT-TH-201ENST00000387441 69 ntBASIC2.54□□□□□ -2
SMSP52788 HMGN1P14-201ENST00000412459 517 ntBASIC2.54□□□□□ -2
SMSP52788 AC092809.3-201ENST00000415453 231 ntBASIC2.54□□□□□ -2
SMSP52788 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.54□□□□□ -2
SMSP52788 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.54□□□□□ -2
SMSP52788 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.54□□□□□ -2
SMSP52788 AC007283.2-201ENST00000424739 197 ntBASIC2.54□□□□□ -2
SMSP52788 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.54□□□□□ -2
SMSP52788 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.54□□□□□ -2
SMSP52788 MRPL50P4-201ENST00000446432 475 ntBASIC2.54□□□□□ -2
SMSP52788 AL136380.1-201ENST00000447970 162 ntBASIC2.54□□□□□ -2
SMSP52788 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
SMSP52788 RNA5SP269-201ENST00000459032 137 ntBASIC2.54□□□□□ -2
SMSP52788 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
SMSP52788 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.54□□□□□ -2
SMSP52788 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
SMSP52788 Y_RNA.689-201ENST00000516589 107 ntBASIC2.54□□□□□ -2
SMSP52788 RNU6-572P-201ENST00000516724 80 ntBASIC2.54□□□□□ -2
SMSP52788 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.54□□□□□ -2
SMSP52788 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.54□□□□□ -2
SMSP52788 AC022616.3-201ENST00000523940 148 ntBASIC2.54□□□□□ -2
SMSP52788 AP003072.2-201ENST00000527756 676 ntBASIC2.54□□□□□ -2
SMSP52788 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.54□□□□□ -2
SMSP52788 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.54□□□□□ -2
SMSP52788 AL121821.2-201ENST00000556081 394 ntBASIC2.54□□□□□ -2
SMSP52788 AC109446.2-201ENST00000567872 497 ntBASIC2.54□□□□□ -2
SMSP52788 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.54□□□□□ -2
SMSP52788 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.54□□□□□ -2
SMSP52788 AL449363.1-201ENST00000617815 186 ntBASIC2.54□□□□□ -2
SMSP52788 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
SMSP52788 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.54□□□□□ -2
SMSP52788 MTND5P30-201ENST00000452896 1731 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms