Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL670379.7-201ENST00000605823 252 ntBASIC4.24□□□□□ -1.73
MRE11P49959 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC103705.1-201ENST00000619013 241 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC244517.12-201ENST00000623581 663 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL732372.2-225ENST00000642124 456 ntBASIC4.24□□□□□ -1.73
MRE11P49959 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MRE11P49959 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
MRE11P49959 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MRE11P49959 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
MRE11P49959 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.24□□□□□ -1.73
MRE11P49959 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.23□□□□□ -1.73
MRE11P49959 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRE11P49959 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRE11P49959 Y_RNA.31-201ENST00000362574 102 ntBASIC4.23□□□□□ -1.73
MRE11P49959 RNU6-254P-201ENST00000363377 107 ntBASIC4.23□□□□□ -1.73
MRE11P49959 Y_RNA.212-201ENST00000364177 102 ntBASIC4.23□□□□□ -1.73
MRE11P49959 SMIM11P1-201ENST00000369586 178 ntBASIC4.23□□□□□ -1.73
MRE11P49959 RNU6-1127P-201ENST00000384580 107 ntBASIC4.23□□□□□ -1.73
MRE11P49959 U8.11-201ENST00000384699 133 ntBASIC4.23□□□□□ -1.73
MRE11P49959 U8.12-201ENST00000384701 133 ntBASIC4.23□□□□□ -1.73
MRE11P49959 MIR30B-201ENST00000384850 88 ntBASIC4.23□□□□□ -1.73
MRE11P49959 MIR607-201ENST00000385241 96 ntBASIC4.23□□□□□ -1.73
MRE11P49959 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AL139396.1-201ENST00000421137 167 ntBASIC4.23□□□□□ -1.73
MRE11P49959 CALM2P2-201ENST00000428512 440 ntBASIC4.23□□□□□ -1.73
MRE11P49959 FABP5P14-201ENST00000437273 393 ntBASIC4.23□□□□□ -1.73
MRE11P49959 RPL32P28-201ENST00000443577 397 ntBASIC4.23□□□□□ -1.73
MRE11P49959 RPS15AP27-201ENST00000449183 343 ntBASIC4.23□□□□□ -1.73
MRE11P49959 SCARNA18-201ENST00000459004 134 ntBASIC4.23□□□□□ -1.73
MRE11P49959 U8.18-201ENST00000459285 133 ntBASIC4.23□□□□□ -1.73
MRE11P49959 Y_RNA.638-201ENST00000459374 113 ntBASIC4.23□□□□□ -1.73
MRE11P49959 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.23□□□□□ -1.73
MRE11P49959 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.23□□□□□ -1.73
MRE11P49959 RNU6-189P-201ENST00000516120 101 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC103783.1-201ENST00000520506 373 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AP006245.1-201ENST00000522549 120 ntBASIC4.23□□□□□ -1.73
MRE11P49959 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.23□□□□□ -1.73
MRE11P49959 RANP3-201ENST00000530970 276 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AP003385.6-201ENST00000531603 374 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC004024.1-201ENST00000549244 247 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.23□□□□□ -1.73
MRE11P49959 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.23□□□□□ -1.73
MRE11P49959 AC023043.2-201ENST00000589678 1026 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC006116.10-201ENST00000591836 581 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC008737.2-201ENST00000599446 118 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC136443.5-201ENST00000603741 370 ntBASIC4.23□□□□□ -1.73
MRE11P49959 CYP2C61P-201ENST00000604072 290 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC022893.3-201ENST00000607665 437 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC019193.3-201ENST00000609144 554 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.23□□□□□ -1.73
MRE11P49959 DUSP12P1-201ENST00000612874 516 ntBASIC4.23□□□□□ -1.73
MRE11P49959 AC048347.1-201ENST00000624621 427 ntBASIC4.23□□□□□ -1.73
MRE11P49959 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRE11P49959 AC007823.1-201ENST00000569932 1566 ntBASIC4.23□□□□□ -1.73
MRE11P49959 OTUD4P1-201ENST00000237841 3067 ntBASIC4.23□□□□□ -1.73
MRE11P49959 USP8P1-201ENST00000494673 3183 ntBASIC4.22□□□□□ -1.73
MRE11P49959 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.22□□□□□ -1.73
MRE11P49959 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
MRE11P49959 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
MRE11P49959 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.22□□□□□ -1.73
MRE11P49959 SNORA22B-201ENST00000383876 138 ntBASIC4.22□□□□□ -1.73
MRE11P49959 RNU6-946P-201ENST00000383878 107 ntBASIC4.22□□□□□ -1.73
MRE11P49959 RNU6-213P-201ENST00000384051 104 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.22□□□□□ -1.73
MRE11P49959 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.22□□□□□ -1.73
MRE11P49959 PMCHL1-202ENST00000423102 261 ntBASIC4.22□□□□□ -1.73
MRE11P49959 SKA2P1-201ENST00000425592 390 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.22□□□□□ -1.73
MRE11P49959 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.22□□□□□ -1.73
MRE11P49959 MTCO3P45-201ENST00000443036 613 ntBASIC4.22□□□□□ -1.73
MRE11P49959 CEACAMP4-201ENST00000457676 421 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.22□□□□□ -1.73
MRE11P49959 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.22□□□□□ -1.73
MRE11P49959 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.22□□□□□ -1.73
MRE11P49959 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.22□□□□□ -1.73
MRE11P49959 OR5D17P-201ENST00000531492 978 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.22□□□□□ -1.73
MRE11P49959 YPEL5P3-201ENST00000547227 352 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.22□□□□□ -1.73
MRE11P49959 ZNF192P1-203ENST00000565888 810 ntBASIC4.22□□□□□ -1.73
MRE11P49959 MIR3922-201ENST00000585192 84 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AC006023.2-201ENST00000609916 167 ntBASIC4.22□□□□□ -1.73
MRE11P49959 AL589994.2-201ENST00000621124 579 ntBASIC4.22□□□□□ -1.73
MRE11P49959 uc_338.22-201ENST00000622722 187 ntBASIC4.22□□□□□ -1.73
MRE11P49959 DDX10P1-201ENST00000448545 1933 ntBASIC4.22□□□□□ -1.73
MRE11P49959 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
MRE11P49959 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MRE11P49959 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MRE11P49959 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.22□□□□□ -1.73
MRE11P49959 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
MRE11P49959 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.21□□□□□ -1.73
MRE11P49959 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 AL137003.2-201ENST00000606924 2538 ntBASIC4.21□□□□□ -1.74
MRE11P49959 Y_RNA.144-201ENST00000363521 113 ntBASIC4.21□□□□□ -1.74
MRE11P49959 RNU6-1188P-201ENST00000363795 107 ntBASIC4.21□□□□□ -1.74
MRE11P49959 RNU6-263P-201ENST00000363811 107 ntBASIC4.21□□□□□ -1.74
MRE11P49959 RNU6-639P-201ENST00000384074 107 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.21□□□□□ -1.74
MRE11P49959 AC126124.2-201ENST00000413542 321 ntBASIC4.21□□□□□ -1.74
MRE11P49959 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms