Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.64□□□□□ -1.83
TM4SF4P48230 AL353729.1-201ENST00000425044 720 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 MTCO1P20-201ENST00000425366 358 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC007560.1-201ENST00000426912 237 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TM4SF4P48230 AL109933.2-201ENST00000452651 260 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.64□□□□□ -1.83
TM4SF4P48230 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 HMGB1P30-201ENST00000492455 606 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.64□□□□□ -1.83
TM4SF4P48230 SUMO2P6-201ENST00000505273 288 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.64□□□□□ -1.83
TM4SF4P48230 AC092436.1-201ENST00000506450 503 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.64□□□□□ -1.83
TM4SF4P48230 RNU6-718P-201ENST00000516166 105 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.64□□□□□ -1.83
TM4SF4P48230 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
TM4SF4P48230 AC091544.4-201ENST00000555268 342 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 MTCO3P24-201ENST00000572729 782 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 MIR4782-201ENST00000577987 79 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.64□□□□□ -1.83
TM4SF4P48230 AC008638.3-201ENST00000603341 463 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC107304.1-201ENST00000604229 296 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TM4SF4P48230 AC233309.1-201ENST00000619522 751 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.64□□□□□ -1.83
TM4SF4P48230 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
TM4SF4P48230 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TM4SF4P48230 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM4SF4P48230 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM4SF4P48230 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.64□□□□□ -1.83
TM4SF4P48230 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM4SF4P48230 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.63□□□□□ -1.83
TM4SF4P48230 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
TM4SF4P48230 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TM4SF4P48230 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM4SF4P48230 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.63□□□□□ -1.83
TM4SF4P48230 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM4SF4P48230 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.63□□□□□ -1.83
TM4SF4P48230 RNU6-270P-201ENST00000364131 105 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM4SF4P48230 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
TM4SF4P48230 RNU6-877P-201ENST00000383868 107 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 RNU6-903P-201ENST00000391270 109 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 RNA5SP39-201ENST00000411245 120 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AC098614.2-201ENST00000426040 255 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 RPL21P40-201ENST00000428586 483 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.63□□□□□ -1.83
TM4SF4P48230 AC022018.1-201ENST00000430685 241 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.63□□□□□ -1.83
TM4SF4P48230 RPL21P41-201ENST00000459863 264 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 LRRC34P2-201ENST00000514850 553 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 RNU4-29P-201ENST00000515943 174 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.63□□□□□ -1.83
TM4SF4P48230 IGHV3-76-201ENST00000522465 295 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 MTND1P35-201ENST00000526739 508 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM4SF4P48230 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.63□□□□□ -1.83
TM4SF4P48230 AL360157.1-201ENST00000565962 87 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.63□□□□□ -1.83
TM4SF4P48230 ATP1B3P1-201ENST00000605365 821 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.63□□□□□ -1.83
TM4SF4P48230 YWHAEP7-203ENST00000622054 312 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AP003122.6-201ENST00000623831 495 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TM4SF4P48230 AL160394.1-201ENST00000624765 724 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AC007496.3-201ENST00000624987 3443 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM4SF4P48230 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.63□□□□□ -1.83
TM4SF4P48230 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF4P48230 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF4P48230 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.62□□□□□ -1.83
TM4SF4P48230 RNY4P14-201ENST00000363656 96 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 RNA5SP139-201ENST00000364340 117 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 RNU1-73P-201ENST00000383971 164 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 SNORD115-47-201ENST00000391226 86 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.62□□□□□ -1.83
TM4SF4P48230 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.62□□□□□ -1.83
TM4SF4P48230 MTATP6P7-201ENST00000453315 681 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 CACYBPP2-201ENST00000453625 678 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.62□□□□□ -1.83
TM4SF4P48230 RNU7-23P-201ENST00000459465 62 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 MTAPP1-201ENST00000489154 819 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AC026801.1-201ENST00000497178 464 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AC114786.4-201ENST00000508771 728 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF4P48230 RNU6-1178P-201ENST00000516674 107 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 RNU6-572P-201ENST00000516724 80 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 SNORA31.21-201ENST00000517180 77 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 MTND4LP26-201ENST00000518144 282 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.62□□□□□ -1.83
TM4SF4P48230 MTND4P7-201ENST00000523876 130 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AL137161.1-201ENST00000532231 390 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AL391261.3-201ENST00000557194 520 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms