Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 IFNA20P-201ENST00000436840 528 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 EEF1E1P1-201ENST00000446998 430 ntBASIC1.22□□□□□ -2.21
RPL28P46779 HMGN1P5-201ENST00000448591 263 ntBASIC1.22□□□□□ -2.21
RPL28P46779 ZNF886P-201ENST00000450781 723 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 RNU7-59P-201ENST00000459101 61 ntBASIC1.22□□□□□ -2.21
RPL28P46779 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPL28P46779 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 RPL7P43-201ENST00000478876 753 ntBASIC1.22□□□□□ -2.21
RPL28P46779 TRBV12-1-201ENST00000479785 344 ntBASIC1.22□□□□□ -2.21
RPL28P46779 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 AC140059.1-201ENST00000489238 361 ntBASIC1.22□□□□□ -2.21
RPL28P46779 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL28P46779 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 AC093752.1-206ENST00000511823 336 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 RNU6-678P-201ENST00000516832 109 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 AC007375.1-201ENST00000554513 578 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 AL136520.1-202ENST00000555494 763 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 MIR4648-201ENST00000580107 72 ntBASIC1.22□□□□□ -2.21
RPL28P46779 MIR3618-201ENST00000580330 88 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL28P46779 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 RNU6-91P-201ENST00000607774 107 ntBASIC1.22□□□□□ -2.21
RPL28P46779 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL28P46779 Y_RNA.783-201ENST00000613546 102 ntBASIC1.22□□□□□ -2.21
RPL28P46779 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL28P46779 AC116618.1-201ENST00000634617 774 ntBASIC1.22□□□□□ -2.21
RPL28P46779 Z99571.1-201ENST00000636677 394 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL28P46779 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPL28P46779 AP000776.1-201ENST00000530032 1663 ntBASIC1.22□□□□□ -2.21
RPL28P46779 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL28P46779 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL28P46779 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPL28P46779 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL28P46779 SNORA64-201ENST00000384674 134 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC078974.1-201ENST00000411597 223 ntBASIC1.21□□□□□ -2.22
RPL28P46779 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AL445685.2-201ENST00000422551 342 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL28P46779 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPL28P46779 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL28P46779 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL28P46779 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.21□□□□□ -2.22
RPL28P46779 AP000542.1-201ENST00000448473 371 ntBASIC1.21□□□□□ -2.22
RPL28P46779 PAXBP1P1-201ENST00000449315 447 ntBASIC1.21□□□□□ -2.22
RPL28P46779 USP9YP10-201ENST00000454868 628 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPL28P46779 SNORA59A-201ENST00000459326 152 ntBASIC1.21□□□□□ -2.22
RPL28P46779 BZW1P2-201ENST00000473537 826 ntBASIC1.21□□□□□ -2.22
RPL28P46779 RPL7P18-201ENST00000478965 734 ntBASIC1.21□□□□□ -2.22
RPL28P46779 RPL38P4-201ENST00000502376 214 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC008549.1-201ENST00000512900 643 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.21□□□□□ -2.22
RPL28P46779 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
RPL28P46779 PSMA3P-201ENST00000555485 635 ntBASIC1.21□□□□□ -2.22
RPL28P46779 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.21□□□□□ -2.22
RPL28P46779 DEFB122-202ENST00000569013 197 ntBASIC1.21□□□□□ -2.22
RPL28P46779 MTND3P13-201ENST00000574391 343 ntBASIC1.21□□□□□ -2.22
RPL28P46779 MIR4419B-201ENST00000577260 68 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.21□□□□□ -2.22
RPL28P46779 MIR4293-201ENST00000584305 78 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL28P46779 BNIP3P26-201ENST00000600827 554 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC034229.4-201ENST00000607861 441 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AL133445.2-201ENST00000611191 527 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AC123767.1-202ENST00000620407 817 ntBASIC1.21□□□□□ -2.22
RPL28P46779 AL356266.1-201ENST00000623311 483 ntBASIC1.21□□□□□ -2.22
RPL28P46779 LINC02211-204ENST00000642024 1070 ntBASIC1.21□□□□□ -2.22
RPL28P46779 ZNF355P-201ENST00000427301 3216 ntBASIC1.21□□□□□ -2.22
RPL28P46779 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL28P46779 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPL28P46779 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
RPL28P46779 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.2□□□□□ -2.22
RPL28P46779 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPL28P46779 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
RPL28P46779 RNU1-23P-201ENST00000363361 144 ntBASIC1.2□□□□□ -2.22
RPL28P46779 SNORD48-201ENST00000364953 64 ntBASIC1.2□□□□□ -2.22
RPL28P46779 RNA5SP363-201ENST00000365072 115 ntBASIC1.2□□□□□ -2.22
RPL28P46779 RNU6-1280P-201ENST00000365211 107 ntBASIC1.2□□□□□ -2.22
RPL28P46779 SNORA70B-201ENST00000384210 135 ntBASIC1.2□□□□□ -2.22
RPL28P46779 SNORD56-201ENST00000413522 71 ntBASIC1.2□□□□□ -2.22
RPL28P46779 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 AL445646.1-201ENST00000431784 216 ntBASIC1.2□□□□□ -2.22
RPL28P46779 USP9YP24-201ENST00000434374 697 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 HSPE1P21-201ENST00000438283 308 ntBASIC1.2□□□□□ -2.22
RPL28P46779 MTND2P29-201ENST00000438595 412 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms