Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-323P-201ENST00000521915 107 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A4P31645 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC6A4P31645 AL157871.3-201ENST00000557231 293 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AC093249.1-201ENST00000567049 203 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 LRRC37A5P-203ENST00000580181 585 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A4P31645 AC133104.2-201ENST00000615272 193 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AC010378.1-201ENST00000619270 362 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A4P31645 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A4P31645 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A4P31645 AC005183.1-201ENST00000603687 1979 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A4P31645 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC6A4P31645 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A4P31645 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A4P31645 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A4P31645 AL359693.1-201ENST00000614959 2407 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC6A4P31645 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 RPL21P23-201ENST00000446654 460 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 SNORD105B-201ENST00000458770 79 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 RNU7-152P-201ENST00000458982 64 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 RNU7-138P-201ENST00000459479 64 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 RPL21P104-201ENST00000464143 478 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 AC117503.1-201ENST00000472241 394 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 AP005597.4-201ENST00000526762 229 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A4P31645 AC004024.1-201ENST00000549244 247 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A4P31645 AC006077.1-201ENST00000604746 343 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC6A4P31645 AC134503.1-201ENST00000633048 54 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.7□□□□□ -1.82
SLC6A4P31645 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SLC6A4P31645 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A4P31645 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A4P31645 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 Y_RNA.33-201ENST00000362591 102 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 Y_RNA.245-201ENST00000364493 95 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 SNORA4.3-201ENST00000365564 137 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 RNU6-43P-201ENST00000384302 107 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 MIR578-201ENST00000384828 96 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 RNU6-370P-201ENST00000411008 104 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 RNU6-607P-201ENST00000411283 108 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 RNU6-954P-201ENST00000411355 107 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 RNU2-71P-201ENST00000411395 189 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AL353621.1-201ENST00000418219 243 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 GPM6BP2-201ENST00000432046 144 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 RPS24P13-201ENST00000442520 397 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC6A4P31645 GPM6BP1-201ENST00000446387 144 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AL360271.2-201ENST00000447710 161 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC6A4P31645 HMGB3P15-201ENST00000507326 574 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 SCARNA15.1-201ENST00000516384 125 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 RNA5SP309-201ENST00000516670 106 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.69□□□□□ -1.82
SLC6A4P31645 OR5D17P-201ENST00000531492 978 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC026371.1-201ENST00000551867 419 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC6A4P31645 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC6A4P31645 KLKP1-201ENST00000595979 403 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC073539.2-201ENST00000597113 165 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC6A4P31645 PART1_1.1-201ENST00000611761 217 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC084781.2-201ENST00000615568 161 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AC090132.2-201ENST00000615881 347 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 ATP5A1P2-202ENST00000616464 443 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 U4.6-201ENST00000621618 127 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 AL031601.2-202ENST00000622650 282 ntBASIC3.69□□□□□ -1.82
SLC6A4P31645 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC6A4P31645 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC6A4P31645 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC6A4P31645 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SLC6A4P31645 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC6A4P31645 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC6A4P31645 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SLC6A4P31645 AC008725.1-201ENST00000605123 2263 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC6A4P31645 NCAPGP1-201ENST00000505112 1814 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 MTND5P1-201ENST00000445440 1375 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SLC6A4P31645 RNU6-600P-201ENST00000362524 99 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 Y_RNA.128-201ENST00000363391 112 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 Y_RNA.326-201ENST00000365176 113 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 SNORD116-29-201ENST00000384516 83 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 RNU6-601P-201ENST00000384540 107 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 MIR218-2-201ENST00000385006 110 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms