Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU5A-8P-201ENST00000364102 114 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 RN7SKP226-201ENST00000364912 300 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 RNU6-140P-201ENST00000384566 108 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC13P31276 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXC13P31276 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC13P31276 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC13P31276 RPL22P17-201ENST00000438729 315 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 RNA5SP269-201ENST00000459032 137 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 RPL23AP70-201ENST00000483361 460 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 RPL9P6-201ENST00000492764 598 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC069439.1-201ENST00000494739 167 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC091951.2-201ENST00000500762 203 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 RNU6-64P-201ENST00000517119 105 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC109329.2-201ENST00000519658 482 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC13P31276 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC13P31276 AL391261.3-201ENST00000557194 520 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC13P31276 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXC13P31276 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC13P31276 MTCO3P13-201ENST00000577757 781 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 MIR4528-201ENST00000577763 90 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 KC877982.1-201ENST00000602313 470 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AP000860.1-201ENST00000605250 559 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC012360.2-201ENST00000609349 391 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC245517.5-201ENST00000611529 162 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC034102.8-201ENST00000615146 484 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 MIR6715A-201ENST00000615929 79 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 CR381653.2-201ENST00000624041 768 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HOXC13P31276 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HOXC13P31276 AC135776.4-201ENST00000624300 1904 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 AC131280.1-202ENST00000624067 4211 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 TEX21P-201ENST00000447107 1476 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC13P31276 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC13P31276 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC13P31276 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC13P31276 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HOXC13P31276 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC13P31276 MIR148B-201ENST00000362252 99 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RNU4-82P-201ENST00000362443 140 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 Y_RNA.46-201ENST00000362695 102 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RNU6-501P-201ENST00000364072 100 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RNU6-876P-201ENST00000391295 104 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC13P31276 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 OOSP1P1-201ENST00000423265 274 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC13P31276 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC13P31276 MTND1P28-201ENST00000435623 950 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AC005094.1-201ENST00000440420 368 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 MTATP6P30-201ENST00000443540 664 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AC020550.1-201ENST00000447385 163 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 MTND1P11-201ENST00000456661 876 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RN7SKP298-201ENST00000515950 94 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RNU6-927P-201ENST00000516199 100 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 RNU6-875P-201ENST00000516488 106 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC13P31276 AL356432.3-201ENST00000568952 465 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC13P31276 MIR3162-201ENST00000581818 82 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 MIR548AB-201ENST00000584917 84 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AL117336.2-201ENST00000602435 335 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC13P31276 AC098614.4-201ENST00000607601 462 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC13P31276 AC007318.2-201ENST00000620999 243 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 AL136313.1-201ENST00000624804 202 ntBASIC3.1□□□□□ -1.91
HOXC13P31276 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC13P31276 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC13P31276 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC13P31276 Y_RNA.38-201ENST00000362617 102 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HOXC13P31276 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 USP9YP13-201ENST00000417797 480 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 BTF3L4P3-201ENST00000418879 476 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AL139413.1-201ENST00000421309 217 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC13P31276 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 TIMM9P1-201ENST00000436122 256 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC13P31276 AC073614.1-201ENST00000438690 650 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AL512286.1-201ENST00000439244 400 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 RPS15AP7-201ENST00000439294 405 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 DNAJC19P4-201ENST00000440115 345 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 GDI2P2-201ENST00000445131 608 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 KLF3P2-201ENST00000465138 268 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 RPS3AP17-201ENST00000472594 777 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 AC103975.1-201ENST00000482506 483 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 MTND5P5-201ENST00000503764 376 ntBASIC3.09□□□□□ -1.91
HOXC13P31276 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC13P31276 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC13P31276 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms