Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL109913.1-201ENST00000421173 514 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AL592045.1-201ENST00000429867 352 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AL603825.1-201ENST00000438481 80 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AL714022.1-201ENST00000439897 151 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 HIGD1AP2-201ENST00000446367 280 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC026801.1-201ENST00000497178 464 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF1P30408 RNU6-991P-201ENST00000516168 107 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TM4SF1P30408 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TM4SF1P30408 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.18□□□□□ -1.9
TM4SF1P30408 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF1P30408 AC005498.1-201ENST00000592125 465 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AL139286.2-201ENST00000606838 396 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AC241585.2-209ENST00000638217 143 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TM4SF1P30408 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TM4SF1P30408 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TM4SF1P30408 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 Y_RNA.51-201ENST00000362725 102 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 RNU6-108P-201ENST00000365558 107 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 RNU6-14P-201ENST00000384630 106 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 RNU4-26P-201ENST00000410270 107 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.17□□□□□ -1.9
TM4SF1P30408 CDK8P2-201ENST00000415020 547 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 DPH3P2-201ENST00000422618 250 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AL356320.1-201ENST00000429616 163 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AL591806.2-201ENST00000433122 173 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 MTCO3P5-201ENST00000433620 714 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 IFNA11P-201ENST00000446352 526 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.17□□□□□ -1.9
TM4SF1P30408 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.17□□□□□ -1.9
TM4SF1P30408 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.17□□□□□ -1.9
TM4SF1P30408 AC092436.1-201ENST00000506450 503 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AC108078.2-201ENST00000510750 236 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.17□□□□□ -1.9
TM4SF1P30408 RNU6-430P-201ENST00000517078 107 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.17□□□□□ -1.9
TM4SF1P30408 MTCO2P4-201ENST00000517968 247 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.17□□□□□ -1.9
TM4SF1P30408 AL845331.3-202ENST00000562856 261 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AL158032.1-201ENST00000605401 106 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 AC245008.1-201ENST00000608123 476 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 U6.114-201ENST00000636407 96 ntBASIC3.17□□□□□ -1.9
TM4SF1P30408 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF1P30408 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM4SF1P30408 RNU6-169P-201ENST00000365336 107 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.16□□□□□ -1.9
TM4SF1P30408 SNORA75-201ENST00000384158 137 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AL079342.1-201ENST00000401460 267 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC007064.1-201ENST00000412238 351 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 USP9YP6-201ENST00000413550 854 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.16□□□□□ -1.9
TM4SF1P30408 MTND4P32-201ENST00000437189 1237 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 RPL36AP51-201ENST00000487216 318 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.16□□□□□ -1.9
TM4SF1P30408 AC116562.3-201ENST00000506136 177 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 MTCO3P28-201ENST00000513351 515 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 SNORA9.3-201ENST00000516383 129 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 SCARNA24.1-201ENST00000516465 137 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 Y_RNA.689-201ENST00000516589 107 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
TM4SF1P30408 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.16□□□□□ -1.9
TM4SF1P30408 AC022634.1-201ENST00000520765 532 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AP003072.2-201ENST00000527756 676 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC068587.5-201ENST00000528506 175 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC024909.2-201ENST00000553035 286 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
TM4SF1P30408 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.16□□□□□ -1.9
TM4SF1P30408 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
TM4SF1P30408 MIR4528-201ENST00000577763 90 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.16□□□□□ -1.9
TM4SF1P30408 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.16□□□□□ -1.9
TM4SF1P30408 AL355877.2-201ENST00000603670 358 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 AC130324.3-201ENST00000614165 542 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 CR381653.2-201ENST00000624041 768 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 Z99571.1-201ENST00000636677 394 ntBASIC3.16□□□□□ -1.9
TM4SF1P30408 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TM4SF1P30408 MTND4P35-201ENST00000604257 1375 ntBASIC3.15□□□□□ -1.9
TM4SF1P30408 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
TM4SF1P30408 RNU1-73P-201ENST00000383971 164 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms