Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.12□□□□□ -1.75
VAMP1P23763 AL670379.2-201ENST00000604983 252 ntBASIC4.12□□□□□ -1.75
VAMP1P23763 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP1P23763 AP000560.1-201ENST00000624150 1937 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP1P23763 AL359854.1-201ENST00000614203 1594 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP1P23763 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP1P23763 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.11□□□□□ -1.75
VAMP1P23763 AC126755.2-208ENST00000327792 462 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AC138969.1-213ENST00000331436 462 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RNU6-1010P-201ENST00000362757 107 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RNA5SP307-201ENST00000362863 116 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RNA5SP335-201ENST00000363817 110 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RNY3P11-201ENST00000364153 102 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 SNORA66-201ENST00000384792 133 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 MIR153-2-201ENST00000385225 87 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 HDGFP1-201ENST00000405943 252 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.11□□□□□ -1.75
VAMP1P23763 DDX39BP1-205ENST00000422507 192 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.11□□□□□ -1.75
VAMP1P23763 AL353752.1-201ENST00000454946 260 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RN7SL517P-201ENST00000462240 305 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RPL27AP5-201ENST00000469428 449 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AL049830.2-201ENST00000480072 201 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AL136038.1-201ENST00000497246 351 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.11□□□□□ -1.75
VAMP1P23763 SNORA25.11-201ENST00000515935 105 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RNA5SP271-201ENST00000516700 88 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.11□□□□□ -1.75
VAMP1P23763 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.11□□□□□ -1.75
VAMP1P23763 RPL21P7-201ENST00000557463 483 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 MIR3136-201ENST00000583498 78 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AL138963.2-201ENST00000605137 226 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AC069200.1-201ENST00000609511 323 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 RMST_6.1-201ENST00000611980 203 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AL731566.2-201ENST00000618971 317 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 AL162373.1-201ENST00000620433 407 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 SNORD98-201ENST00000636377 67 ntBASIC4.11□□□□□ -1.75
VAMP1P23763 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VAMP1P23763 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
VAMP1P23763 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
VAMP1P23763 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VAMP1P23763 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.1□□□□□ -1.75
VAMP1P23763 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 RN7SKP104-201ENST00000362605 328 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 RNU4-42P-201ENST00000364738 142 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 U1.1-201ENST00000384101 164 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 Y_RNA.526-201ENST00000384572 110 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VAMP1P23763 SNORA77-201ENST00000408716 125 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 MTCO3P19-201ENST00000415864 321 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.1□□□□□ -1.75
VAMP1P23763 Z82188.1-201ENST00000436709 154 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 RPL23AP52-201ENST00000439311 478 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.1□□□□□ -1.75
VAMP1P23763 RPL36AP39-201ENST00000445859 318 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 RPS17P2-201ENST00000461663 408 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC104339.1-201ENST00000465478 348 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AIG1P1-201ENST00000503376 148 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AL592156.1-201ENST00000508758 304 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.1□□□□□ -1.75
VAMP1P23763 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.1□□□□□ -1.75
VAMP1P23763 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 VN1R91P-201ENST00000594377 169 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.1□□□□□ -1.75
VAMP1P23763 RPS29P30-201ENST00000600975 111 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC087783.2-201ENST00000605070 562 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 U2.1-201ENST00000618978 145 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC127024.6-201ENST00000621598 424 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC005086.4-201ENST00000623065 213 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
VAMP1P23763 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.1□□□□□ -1.75
VAMP1P23763 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 AL109809.4-201ENST00000603520 2185 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP1P23763 DHX9P1-201ENST00000436565 3076 ntBASIC4.1□□□□□ -1.75
VAMP1P23763 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.1□□□□□ -1.75
VAMP1P23763 MTND5P27-201ENST00000428871 1720 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VAMP1P23763 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.09□□□□□ -1.75
VAMP1P23763 ZNF72P-201ENST00000425869 1908 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP1P23763 AL590240.1-201ENST00000334118 313 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 OR56A5-201ENST00000340110 738 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 Y_RNA.358-201ENST00000365491 99 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 RNA5SP122-201ENST00000384457 108 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 Y_RNA.527-201ENST00000384573 102 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 MIR600-201ENST00000385007 98 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC092642.1-201ENST00000392417 425 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC004552.1-201ENST00000419089 348 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP1P23763 AL590556.1-201ENST00000423231 483 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 BX323845.1-201ENST00000432417 179 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP1P23763 RPS29P9-201ENST00000440360 171 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 RPS26P3-201ENST00000470205 348 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms