Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Y_RNA.582-201ENST00000391023 95 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RNA5SP354-201ENST00000391247 136 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL356057.2-201ENST00000403318 432 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL162578.1-201ENST00000406202 378 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 FCF1P9-201ENST00000412546 282 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC4P09017 BX295541.1-201ENST00000417774 250 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL589872.1-201ENST00000426602 288 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL512844.2-201ENST00000433990 593 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC4P09017 HIGD1AP2-201ENST00000446367 280 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC4P09017 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC4P09017 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC4P09017 MTND1P3-201ENST00000484956 952 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.34□□□□□ -2.03
HOXC4P09017 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.34□□□□□ -2.03
HOXC4P09017 SNORA18.6-201ENST00000516792 115 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RNU6-528P-201ENST00000516926 100 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RNU6-1003P-201ENST00000517099 105 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 SNORA31.22-201ENST00000517204 135 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 AC123904.2-201ENST00000548059 300 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC087883.1-201ENST00000551882 391 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC124947.2-202ENST00000552735 133 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RPL21P5-201ENST00000554662 472 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL353997.4-201ENST00000586196 166 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 UBE2L4-201ENST00000587688 464 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AP001429.1-201ENST00000602568 530 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC013553.2-201ENST00000604244 589 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC126118.1-201ENST00000607744 628 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC007684.1-201ENST00000609671 477 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC068944.2-201ENST00000610373 403 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC091304.9-201ENST00000612091 226 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AP001506.1-201ENST00000615444 211 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL158801.5-201ENST00000623123 465 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AL159972.1-201ENST00000625150 448 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 OR5AK4P-201ENST00000635912 903 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HOXC4P09017 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HOXC4P09017 AC093536.2-201ENST00000565257 1406 ntBASIC2.34□□□□□ -2.04
HOXC4P09017 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC4P09017 Y_RNA.6-201ENST00000362350 114 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 Y_RNA.234-201ENST00000364409 97 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU6-1042P-201ENST00000384204 107 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU6-1207P-201ENST00000384343 107 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 MIR514A1-201ENST00000385133 98 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AL356421.1-201ENST00000403255 413 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 SNORA3.2-201ENST00000408221 125 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU6-193P-201ENST00000410977 107 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 Z85995.1-201ENST00000415547 335 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AL365496.1-201ENST00000426885 215 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AL358934.1-201ENST00000432346 324 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC009961.2-201ENST00000435771 251 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC4P09017 snoU109.1-201ENST00000459339 135 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RPL9P6-201ENST00000492764 598 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC105252.1-201ENST00000503089 286 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC4P09017 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC4P09017 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC4P09017 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU6-928P-201ENST00000516876 104 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU6-714P-201ENST00000516963 103 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNU6-430P-201ENST00000517078 107 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AP003467.2-201ENST00000520175 319 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC4P09017 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC4P09017 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC4P09017 TPRKBP2-201ENST00000565969 475 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
HOXC4P09017 AL022154.1-201ENST00000604698 785 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC4P09017 AC004067.1-201ENST00000608733 700 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AL355472.4-201ENST00000610233 626 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AL590099.1-201ENST00000615276 138 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC002550.2-201ENST00000621246 394 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC012150.2-201ENST00000621300 544 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC4P09017 AC079597.1-201ENST00000624306 508 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 AC110994.2-201ENST00000635481 492 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC4P09017 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC4P09017 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC4P09017 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC4P09017 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC4P09017 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.33□□□□□ -2.04
HOXC4P09017 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC4P09017 AL049641.1-201ENST00000441055 1948 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC092125.1-201ENST00000562568 1995 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXC4P09017 RNU6-270P-201ENST00000364131 105 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms