Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC022418.1-201ENST00000624118 445 ntBASIC3.64□□□□□ -1.83
RHOP08100 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.64□□□□□ -1.83
RHOP08100 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RHOP08100 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RHOP08100 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RHOP08100 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RHOP08100 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
RHOP08100 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 RNA5SP322-201ENST00000363617 119 ntBASIC3.63□□□□□ -1.83
RHOP08100 MIR634-201ENST00000385208 97 ntBASIC3.63□□□□□ -1.83
RHOP08100 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.63□□□□□ -1.83
RHOP08100 RNA5SP111-201ENST00000411386 101 ntBASIC3.63□□□□□ -1.83
RHOP08100 RPL37P10-201ENST00000412884 288 ntBASIC3.63□□□□□ -1.83
RHOP08100 AC017079.2-201ENST00000416102 485 ntBASIC3.63□□□□□ -1.83
RHOP08100 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
RHOP08100 AL160275.3-201ENST00000423876 471 ntBASIC3.63□□□□□ -1.83
RHOP08100 SKA2P1-201ENST00000425592 390 ntBASIC3.63□□□□□ -1.83
RHOP08100 VDAC1P3-201ENST00000434069 851 ntBASIC3.63□□□□□ -1.83
RHOP08100 FABP5P14-201ENST00000437273 393 ntBASIC3.63□□□□□ -1.83
RHOP08100 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.63□□□□□ -1.83
RHOP08100 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.63□□□□□ -1.83
RHOP08100 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.63□□□□□ -1.83
RHOP08100 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.63□□□□□ -1.83
RHOP08100 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.63□□□□□ -1.83
RHOP08100 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.63□□□□□ -1.83
RHOP08100 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.63□□□□□ -1.83
RHOP08100 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.63□□□□□ -1.83
RHOP08100 AC007151.1-201ENST00000572774 483 ntBASIC3.63□□□□□ -1.83
RHOP08100 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.63□□□□□ -1.83
RHOP08100 AC012493.2-201ENST00000595083 291 ntBASIC3.63□□□□□ -1.83
RHOP08100 AC022893.3-201ENST00000607665 437 ntBASIC3.63□□□□□ -1.83
RHOP08100 DUSP12P1-201ENST00000612874 516 ntBASIC3.63□□□□□ -1.83
RHOP08100 AL359757.2-201ENST00000624309 274 ntBASIC3.63□□□□□ -1.83
RHOP08100 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RHOP08100 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
RHOP08100 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.63□□□□□ -1.83
RHOP08100 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
RHOP08100 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RHOP08100 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RHOP08100 HSPA8P1-201ENST00000425843 1833 ntBASIC3.63□□□□□ -1.83
RHOP08100 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RHOP08100 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RHOP08100 ZNF519P1-201ENST00000449011 1626 ntBASIC3.62□□□□□ -1.83
RHOP08100 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.62□□□□□ -1.83
RHOP08100 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RHOP08100 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RHOP08100 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RHOP08100 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RHOP08100 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RHOP08100 Y_RNA.128-201ENST00000363391 112 ntBASIC3.62□□□□□ -1.83
RHOP08100 RNU6-173P-201ENST00000364215 104 ntBASIC3.62□□□□□ -1.83
RHOP08100 SNORD116-11-201ENST00000383882 92 ntBASIC3.62□□□□□ -1.83
RHOP08100 RNU1-89P-201ENST00000384592 164 ntBASIC3.62□□□□□ -1.83
RHOP08100 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RHOP08100 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RHOP08100 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
RHOP08100 MIR548P-201ENST00000408336 84 ntBASIC3.62□□□□□ -1.83
RHOP08100 U3.39-201ENST00000408569 239 ntBASIC3.62□□□□□ -1.83
RHOP08100 RN7SKP111-201ENST00000410349 271 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC096664.2-201ENST00000411843 406 ntBASIC3.62□□□□□ -1.83
RHOP08100 AL513331.1-201ENST00000411908 397 ntBASIC3.62□□□□□ -1.83
RHOP08100 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.62□□□□□ -1.83
RHOP08100 ATG3P1-201ENST00000419507 911 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC079780.1-201ENST00000428259 207 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
RHOP08100 RPL23AP69-201ENST00000431134 458 ntBASIC3.62□□□□□ -1.83
RHOP08100 RPL32P28-201ENST00000443577 397 ntBASIC3.62□□□□□ -1.83
RHOP08100 RPS24P6-201ENST00000452670 400 ntBASIC3.62□□□□□ -1.83
RHOP08100 ANP32BP2-201ENST00000454525 545 ntBASIC3.62□□□□□ -1.83
RHOP08100 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.62□□□□□ -1.83
RHOP08100 HMGN2P7-201ENST00000456186 273 ntBASIC3.62□□□□□ -1.83
RHOP08100 RPL37P6-201ENST00000460682 294 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC087588.1-201ENST00000462203 316 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC079140.5-201ENST00000507882 310 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC005741.1-201ENST00000511094 432 ntBASIC3.62□□□□□ -1.83
RHOP08100 NDUFB4P9-201ENST00000511646 388 ntBASIC3.62□□□□□ -1.83
RHOP08100 RNU6-273P-201ENST00000516937 96 ntBASIC3.62□□□□□ -1.83
RHOP08100 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
RHOP08100 AL355836.1-201ENST00000555951 870 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
RHOP08100 MIR5692C1-201ENST00000585309 91 ntBASIC3.62□□□□□ -1.83
RHOP08100 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC124303.1-201ENST00000605703 360 ntBASIC3.62□□□□□ -1.83
RHOP08100 AL627309.6-201ENST00000606857 840 ntBASIC3.62□□□□□ -1.83
RHOP08100 AC098657.3-201ENST00000620434 263 ntBASIC3.62□□□□□ -1.83
RHOP08100 AL360181.4-201ENST00000621752 134 ntBASIC3.62□□□□□ -1.83
RHOP08100 MTND4LP32-201ENST00000636111 270 ntBASIC3.62□□□□□ -1.83
RHOP08100 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.62□□□□□ -1.83
RHOP08100 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.61□□□□□ -1.83
RHOP08100 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RHOP08100 SNORA4.3-201ENST00000365564 137 ntBASIC3.61□□□□□ -1.83
RHOP08100 RNU6-128P-201ENST00000383976 107 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms