Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.21□□□□□ -1.58
PTCD1O75127 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.21□□□□□ -1.58
PTCD1O75127 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.21□□□□□ -1.58
PTCD1O75127 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTCD1O75127 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.21□□□□□ -1.58
PTCD1O75127 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.21□□□□□ -1.58
PTCD1O75127 Z98751.3-201ENST00000604447 521 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 SNORA51-201ENST00000606420 132 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 AC004792.1-201ENST00000614523 137 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 AL138825.1-201ENST00000618587 192 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 AC132825.6-201ENST00000638861 357 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCD1O75127 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCD1O75127 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.21□□□□□ -1.58
PTCD1O75127 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PTCD1O75127 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PTCD1O75127 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.2□□□□□ -1.58
PTCD1O75127 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 AC106871.1-201ENST00000568324 3102 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 DEFB108F-201ENST00000344638 222 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 RNU6-212P-201ENST00000362642 104 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 SNORD35B-201ENST00000363660 87 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 RNU6-338P-201ENST00000383888 105 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 Y_RNA.518-201ENST00000384552 113 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 U8.11-201ENST00000384699 133 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 U8.12-201ENST00000384701 133 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 AL513475.1-201ENST00000406602 315 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 AL158156.1-201ENST00000422509 473 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.2□□□□□ -1.58
PTCD1O75127 AC073910.1-201ENST00000445047 438 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 U8.18-201ENST00000459285 133 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 AC010285.1-201ENST00000470580 392 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 HMGN2P13-201ENST00000476476 274 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 RPL29P14-201ENST00000495837 428 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCD1O75127 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.2□□□□□ -1.58
PTCD1O75127 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCD1O75127 MIR5188-201ENST00000583467 113 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.2□□□□□ -1.58
PTCD1O75127 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.2□□□□□ -1.58
PTCD1O75127 AC009779.6-201ENST00000603972 165 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 RMST_4.1-201ENST00000616886 107 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 AC008669.1-201ENST00000565823 2178 ntBASIC5.2□□□□□ -1.58
PTCD1O75127 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PTCD1O75127 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCD1O75127 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCD1O75127 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.2□□□□□ -1.58
PTCD1O75127 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCD1O75127 RNU4-42P-201ENST00000364738 142 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 RNA5SP240-201ENST00000365355 128 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 AL138885.1-201ENST00000405921 675 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 SNORA57.3-201ENST00000411095 141 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 OR2AQ1P-201ENST00000451972 200 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 RNU7-169P-201ENST00000459456 61 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 RPL7P49-201ENST00000471402 708 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 Y_RNA.687-201ENST00000516558 91 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 RNU6-570P-201ENST00000517051 105 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 RNA5SP179-201ENST00000517284 121 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCD1O75127 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCD1O75127 AC012468.1-201ENST00000604888 430 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 AC091167.4-201ENST00000605079 184 ntBASIC5.19□□□□□ -1.58
PTCD1O75127 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCD1O75127 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCD1O75127 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
PTCD1O75127 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCD1O75127 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCD1O75127 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCD1O75127 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCD1O75127 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
PTCD1O75127 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PTCD1O75127 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-37P-201ENST00000362692 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 SNORD27-201ENST00000363981 72 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-11P-201ENST00000364234 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 Y_RNA.270-201ENST00000364693 104 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-7-201ENST00000364784 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-8-201ENST00000365467 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-25P-201ENST00000383873 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-1-201ENST00000383898 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-48P-201ENST00000384161 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-36P-201ENST00000384172 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-4P-201ENST00000384205 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-5P-201ENST00000384238 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-662P-201ENST00000384253 104 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-3P-201ENST00000384314 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-16P-201ENST00000384385 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-15P-201ENST00000384534 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-2-201ENST00000384627 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-29P-201ENST00000384637 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-9-201ENST00000384776 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-493P-201ENST00000391321 108 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms