Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SSX4O60224 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX4O60224 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX4O60224 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX4O60224 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX4O60224 Y_RNA.33-201ENST00000362591 102 ntBASIC2.85□□□□□ -1.95
SSX4O60224 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
SSX4O60224 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL031121.1-201ENST00000406553 254 ntBASIC2.85□□□□□ -1.95
SSX4O60224 NDUFS5P4-201ENST00000412983 318 ntBASIC2.85□□□□□ -1.95
SSX4O60224 RPL26P27-201ENST00000414397 437 ntBASIC2.85□□□□□ -1.95
SSX4O60224 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
SSX4O60224 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX4O60224 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX4O60224 AL353678.1-201ENST00000422735 741 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL353729.1-201ENST00000425044 720 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL365496.1-201ENST00000426885 215 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AC104332.2-201ENST00000429959 156 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX4O60224 AL606489.2-201ENST00000433886 234 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX4O60224 RPL7P54-201ENST00000438336 674 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AC104058.1-201ENST00000448028 297 ntBASIC2.85□□□□□ -1.95
SSX4O60224 RPL37P4-201ENST00000448908 268 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL049873.1-201ENST00000480540 376 ntBASIC2.85□□□□□ -1.95
SSX4O60224 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX4O60224 AC009901.1-201ENST00000506703 541 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AC009646.1-201ENST00000510455 318 ntBASIC2.85□□□□□ -1.95
SSX4O60224 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX4O60224 RNU6-56P-201ENST00000516986 93 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX4O60224 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX4O60224 AL138889.2-201ENST00000603883 242 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL355598.1-201ENST00000604169 202 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AC004852.3-201ENST00000614131 326 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL354950.2-201ENST00000617939 290 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AC090617.7-201ENST00000623952 126 ntBASIC2.85□□□□□ -1.95
SSX4O60224 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX4O60224 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
SSX4O60224 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX4O60224 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
SSX4O60224 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSX4O60224 AC092435.3-201ENST00000565538 3654 ntBASIC2.84□□□□□ -1.95
SSX4O60224 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSX4O60224 AC091564.4-201ENST00000533934 2194 ntBASIC2.84□□□□□ -1.95
SSX4O60224 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.84□□□□□ -1.95
SSX4O60224 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSX4O60224 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SSX4O60224 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 MFSD8-233ENST00000641482 4860 ntBASIC2.84□□□□□ -1.95
SSX4O60224 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RNU1-70P-201ENST00000362618 164 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RNU6-1085P-201ENST00000363576 107 ntBASIC2.84□□□□□ -1.95
SSX4O60224 Y_RNA.372-201ENST00000365599 102 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RNU6-395P-201ENST00000365662 106 ntBASIC2.84□□□□□ -1.95
SSX4O60224 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 SNORA75B-201ENST00000384053 137 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RNU6-658P-201ENST00000384606 106 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RNU6-780P-201ENST00000391030 104 ntBASIC2.84□□□□□ -1.95
SSX4O60224 U3.26-201ENST00000391236 204 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RN7SKP111-201ENST00000410349 271 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RNA5SP344-201ENST00000411081 104 ntBASIC2.84□□□□□ -1.95
SSX4O60224 EEF1A1P40-201ENST00000412883 573 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 BPY2DP-201ENST00000422208 265 ntBASIC2.84□□□□□ -1.95
SSX4O60224 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 MTCYBP8-201ENST00000422855 651 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.84□□□□□ -1.95
SSX4O60224 TIMM9P3-201ENST00000428659 274 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 MTND3P21-201ENST00000433774 331 ntBASIC2.84□□□□□ -1.95
SSX4O60224 CST9LP2-201ENST00000437612 320 ntBASIC2.84□□□□□ -1.95
SSX4O60224 BRK1P2-201ENST00000442875 223 ntBASIC2.84□□□□□ -1.95
SSX4O60224 Z75741.1-201ENST00000446793 314 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 FDX1P2-201ENST00000450769 375 ntBASIC2.84□□□□□ -1.95
SSX4O60224 MTATP6P7-201ENST00000453315 681 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 GMFBP1-201ENST00000467831 427 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
SSX4O60224 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.84□□□□□ -1.95
SSX4O60224 AC019235.1-201ENST00000503847 207 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX4O60224 RNU6-572P-201ENST00000516724 80 ntBASIC2.84□□□□□ -1.95
SSX4O60224 RN7SKP219-201ENST00000516825 296 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AP005435.4-201ENST00000529514 284 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX4O60224 AC104383.1-201ENST00000530297 370 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AC069234.5-201ENST00000611056 416 ntBASIC2.84□□□□□ -1.95
SSX4O60224 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.84□□□□□ -1.95
SSX4O60224 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
SSX4O60224 CR381653.2-201ENST00000624041 768 ntBASIC2.84□□□□□ -1.95
SSX4O60224 AC091903.1-201ENST00000624322 454 ntBASIC2.84□□□□□ -1.95
SSX4O60224 U6.99-201ENST00000637524 83 ntBASIC2.84□□□□□ -1.95
SSX4O60224 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms