Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN3O15551 MTND4LP18-201ENST00000526864 291 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AP000889.2-201ENST00000532684 490 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN3O15551 AGGF1P5-201ENST00000567900 919 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC105245.1-201ENST00000581934 244 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN3O15551 MTCYBP22-201ENST00000603788 447 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC011458.1-201ENST00000604034 617 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC144521.1-201ENST00000607148 956 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN3O15551 RN7SL853P-201ENST00000617250 223 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC025048.6-202ENST00000627667 438 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN3O15551 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN3O15551 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN3O15551 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN3O15551 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN3O15551 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLDN3O15551 RNU6-486P-201ENST00000363116 107 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 RNU6-188P-201ENST00000364207 107 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 SNORA70B-201ENST00000384210 135 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 RN7SKP192-201ENST00000411291 327 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN3O15551 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN3O15551 AL353777.1-201ENST00000425552 326 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN3O15551 AL591212.2-201ENST00000433923 257 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 BRK1P2-201ENST00000442875 223 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 GDI2P2-201ENST00000445131 608 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 SSXP1-201ENST00000453640 473 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN3O15551 DYNLL1P5-201ENST00000467158 270 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.4□□□□□ -2.03
CLDN3O15551 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN3O15551 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN3O15551 SNORA25.11-201ENST00000515935 105 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 RNU6-572P-201ENST00000516724 80 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 RNU6-201P-201ENST00000517100 61 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN3O15551 NRBF2P1-201ENST00000587407 859 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AC018714.1-201ENST00000605028 208 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
CLDN3O15551 AC011890.2-201ENST00000613393 294 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AC068787.1-201ENST00000623908 691 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN3O15551 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN3O15551 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 AL109809.4-201ENST00000603520 2185 ntBASIC2.4□□□□□ -2.03
CLDN3O15551 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN3O15551 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN3O15551 U8.2-201ENST00000363156 134 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 SNORD113-6-201ENST00000363345 75 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 RNU6-1280P-201ENST00000365211 107 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 SMIM11P1-201ENST00000369586 178 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 MIR301A-201ENST00000385261 86 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 OR51A5P-201ENST00000415429 942 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AC007560.1-201ENST00000426912 237 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN3O15551 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN3O15551 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN3O15551 AC093899.1-201ENST00000457984 376 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 MIR892C-201ENST00000516410 77 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 SNORA31.11-201ENST00000516528 139 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 RNU6-677P-201ENST00000516914 101 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AC022616.6-201ENST00000520479 119 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AC025755.1-201ENST00000521306 278 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AP005902.1-201ENST00000521358 186 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 MTND2P32-201ENST00000521584 1038 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AC084851.1-201ENST00000529105 249 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 ELOCP32-201ENST00000548625 324 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN3O15551 ISCA1P3-201ENST00000577104 373 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN3O15551 AC027449.1-201ENST00000608890 407 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 MTND5P42-201ENST00000637720 498 ntBASIC2.39□□□□□ -2.03
CLDN3O15551 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CLDN3O15551 AL139276.1-201ENST00000311910 1001 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 RPL23AP39-201ENST00000415533 405 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 RPS15AP12-201ENST00000419498 388 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN3O15551 AC096638.1-201ENST00000444678 216 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 Z73417.1-201ENST00000447373 778 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN3O15551 AL139824.2-201ENST00000458731 1095 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 SNORD11.1-201ENST00000459482 85 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AC080013.2-201ENST00000460866 323 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.38□□□□□ -2.03
CLDN3O15551 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN3O15551 RPL22P13-201ENST00000493291 347 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
CLDN3O15551 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms