Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
CHD1O14646 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHD1O14646 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CHD1O14646 RPL39P29-201ENST00000447779 157 ntBASIC1.03□□□□□ -2.24
CHD1O14646 SUMO2P2-201ENST00000456482 255 ntBASIC1.03□□□□□ -2.24
CHD1O14646 AC018437.1-201ENST00000492214 406 ntBASIC1.03□□□□□ -2.24
CHD1O14646 DEFB108D-201ENST00000527787 222 ntBASIC1.03□□□□□ -2.24
CHD1O14646 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.03□□□□□ -2.24
CHD1O14646 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.03□□□□□ -2.24
CHD1O14646 MIR3921-201ENST00000577308 85 ntBASIC1.03□□□□□ -2.24
CHD1O14646 AC013244.2-201ENST00000603396 103 ntBASIC1.03□□□□□ -2.24
CHD1O14646 Z69720.2-201ENST00000624755 279 ntBASIC1.03□□□□□ -2.24
CHD1O14646 MIR7157-201ENST00000635801 60 ntBASIC1.03□□□□□ -2.24
CHD1O14646 RNU6-374P-201ENST00000364146 108 ntBASIC1.03□□□□□ -2.24
CHD1O14646 MTND2P19-201ENST00000449129 1012 ntBASIC1.03□□□□□ -2.24
CHD1O14646 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.03□□□□□ -2.24
CHD1O14646 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.03□□□□□ -2.24
CHD1O14646 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.03□□□□□ -2.24
CHD1O14646 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
CHD1O14646 RNA5SP125-201ENST00000364843 120 ntBASIC1.02□□□□□ -2.25
CHD1O14646 RNU6-1035P-201ENST00000384477 107 ntBASIC1.02□□□□□ -2.25
CHD1O14646 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.02□□□□□ -2.25
CHD1O14646 AL161651.1-201ENST00000440882 223 ntBASIC1.02□□□□□ -2.25
CHD1O14646 FGF7P5-201ENST00000441829 291 ntBASIC1.02□□□□□ -2.25
CHD1O14646 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.02□□□□□ -2.25
CHD1O14646 RPL30P5-201ENST00000494923 336 ntBASIC1.02□□□□□ -2.25
CHD1O14646 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.02□□□□□ -2.25
CHD1O14646 AF213884.2-201ENST00000510417 903 ntBASIC1.02□□□□□ -2.25
CHD1O14646 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.02□□□□□ -2.25
CHD1O14646 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.02□□□□□ -2.25
CHD1O14646 AL133241.1-201ENST00000556832 487 ntBASIC1.02□□□□□ -2.25
CHD1O14646 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.02□□□□□ -2.25
CHD1O14646 RNU6-222P-201ENST00000362438 107 ntBASIC1.01□□□□□ -2.25
CHD1O14646 U3.13-201ENST00000364804 214 ntBASIC1.01□□□□□ -2.25
CHD1O14646 RNA5SP63-201ENST00000391225 112 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AC109927.2-201ENST00000506416 303 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.01□□□□□ -2.25
CHD1O14646 AC055876.5-201ENST00000605667 259 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.01□□□□□ -2.25
CHD1O14646 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
CHD1O14646 RNA5SP240-201ENST00000365355 128 ntBASIC1.01□□□□□ -2.25
CHD1O14646 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CHD1O14646 MRPS36P1-201ENST00000421291 307 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AC092047.1-201ENST00000424997 240 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.01□□□□□ -2.25
CHD1O14646 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.01□□□□□ -2.25
CHD1O14646 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.01□□□□□ -2.25
CHD1O14646 AC114786.4-201ENST00000508771 728 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AC114797.1-201ENST00000514003 728 ntBASIC1.01□□□□□ -2.25
CHD1O14646 SNORA31.13-201ENST00000516624 135 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AP001485.1-201ENST00000604799 199 ntBASIC1.01□□□□□ -2.25
CHD1O14646 AC008443.7-201ENST00000622195 246 ntBASIC1.01□□□□□ -2.25
CHD1O14646 MIR6866-201ENST00000638146 69 ntBASIC1.01□□□□□ -2.25
CHD1O14646 ZNF29P-201ENST00000225587 168 ntBASIC1□□□□□ -2.25
CHD1O14646 MIR1303-201ENST00000408625 86 ntBASIC1□□□□□ -2.25
CHD1O14646 RNU2-70P-201ENST00000410718 179 ntBASIC1□□□□□ -2.25
CHD1O14646 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1□□□□□ -2.25
CHD1O14646 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1□□□□□ -2.25
CHD1O14646 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1□□□□□ -2.25
CHD1O14646 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1□□□□□ -2.25
CHD1O14646 RNU6-362P-201ENST00000516736 90 ntBASIC1□□□□□ -2.25
CHD1O14646 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHD1O14646 AP001269.3-201ENST00000588718 329 ntBASIC1□□□□□ -2.25
CHD1O14646 AP003400.5-201ENST00000624827 617 ntBASIC1□□□□□ -2.25
CHD1O14646 MTND4P8-201ENST00000514997 1362 ntBASIC0.99□□□□□ -2.25
CHD1O14646 DSTNP4-201ENST00000399472 474 ntBASIC0.99□□□□□ -2.25
CHD1O14646 RPS24P7-201ENST00000416921 246 ntBASIC0.99□□□□□ -2.25
CHD1O14646 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.99□□□□□ -2.25
CHD1O14646 AP003484.1-201ENST00000530974 250 ntBASIC0.99□□□□□ -2.25
CHD1O14646 EEF1B2P4-201ENST00000551398 348 ntBASIC0.99□□□□□ -2.25
CHD1O14646 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.99□□□□□ -2.25
CHD1O14646 AC096720.1-201ENST00000604441 183 ntBASIC0.99□□□□□ -2.25
CHD1O14646 AC016925.2-201ENST00000605108 242 ntBASIC0.99□□□□□ -2.25
CHD1O14646 AC068057.2-201ENST00000624047 895 ntBASIC0.99□□□□□ -2.25
CHD1O14646 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
CHD1O14646 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.98□□□□□ -2.25
CHD1O14646 RN7SKP61-201ENST00000410642 295 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD1O14646 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.98□□□□□ -2.25
CHD1O14646 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD1O14646 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.98□□□□□ -2.25
CHD1O14646 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AC147055.4-201ENST00000504399 745 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD1O14646 SNORA44.1-201ENST00000517031 108 ntBASIC0.98□□□□□ -2.25
CHD1O14646 BNIP3P25-201ENST00000596023 559 ntBASIC0.98□□□□□ -2.25
CHD1O14646 CYP2C61P-201ENST00000604072 290 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AC100821.1-201ENST00000523153 2479 ntBASIC0.98□□□□□ -2.25
CHD1O14646 MIR618-201ENST00000385287 98 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.98□□□□□ -2.25
CHD1O14646 AC097499.1-201ENST00000444277 208 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD1O14646 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD1O14646 FAM60CP-201ENST00000591086 664 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.98□□□□□ -2.25
CHD1O14646 AC013468.1-201ENST00000608680 598 ntBASIC0.98□□□□□ -2.25
CHD1O14646 AC092192.1-201ENST00000633154 1018 ntBASIC0.98□□□□□ -2.25
CHD1O14646 MIR6759-201ENST00000638110 65 ntBASIC0.98□□□□□ -2.25
CHD1O14646 OR5H6-203ENST00000642105 978 ntBASIC0.98□□□□□ -2.25
CHD1O14646 RNU6-418P-201ENST00000384035 107 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms