Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MTCYBP22-201ENST00000603788 447 ntBASIC1.84□□□□□ -2.11
DFFAO00273 MTND3P19-201ENST00000603825 345 ntBASIC1.84□□□□□ -2.11
DFFAO00273 BNIP3P31-201ENST00000604515 566 ntBASIC1.84□□□□□ -2.11
DFFAO00273 AL109620.1-201ENST00000618738 1197 ntBASIC1.84□□□□□ -2.11
DFFAO00273 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.84□□□□□ -2.11
DFFAO00273 AC005858.4-201ENST00000623191 700 ntBASIC1.84□□□□□ -2.11
DFFAO00273 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
DFFAO00273 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.12
DFFAO00273 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.84□□□□□ -2.12
DFFAO00273 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
DFFAO00273 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 TXNL1P1-201ENST00000429528 554 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.83□□□□□ -2.12
DFFAO00273 AC004383.1-201ENST00000438135 289 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 YWHAEP4-201ENST00000505390 198 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AC010587.2-201ENST00000511727 448 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
DFFAO00273 SNORA31.25-201ENST00000517242 134 ntBASIC1.83□□□□□ -2.12
DFFAO00273 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
DFFAO00273 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.83□□□□□ -2.12
DFFAO00273 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.83□□□□□ -2.12
DFFAO00273 AC007375.1-201ENST00000554513 578 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AL138963.2-201ENST00000605137 226 ntBASIC1.83□□□□□ -2.12
DFFAO00273 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
DFFAO00273 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.83□□□□□ -2.12
DFFAO00273 AF129408.1-201ENST00000608767 431 ntBASIC1.83□□□□□ -2.12
DFFAO00273 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
DFFAO00273 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.83□□□□□ -2.12
DFFAO00273 AC131280.1-202ENST00000624067 4211 ntBASIC1.83□□□□□ -2.12
DFFAO00273 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
DFFAO00273 RNU6-1284P-201ENST00000363701 100 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
DFFAO00273 USP9YP6-201ENST00000413550 854 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.82□□□□□ -2.12
DFFAO00273 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.82□□□□□ -2.12
DFFAO00273 HMGB1P27-201ENST00000431429 603 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.82□□□□□ -2.12
DFFAO00273 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.82□□□□□ -2.12
DFFAO00273 AL117351.1-201ENST00000438864 766 ntBASIC1.82□□□□□ -2.12
DFFAO00273 USP9YP15-201ENST00000442391 422 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC092001.1-201ENST00000453012 261 ntBASIC1.82□□□□□ -2.12
DFFAO00273 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.82□□□□□ -2.12
DFFAO00273 AC055855.1-201ENST00000489563 579 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC104564.1-201ENST00000493028 407 ntBASIC1.82□□□□□ -2.12
DFFAO00273 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
DFFAO00273 SMURF2P1-201ENST00000514992 481 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.82□□□□□ -2.12
DFFAO00273 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.82□□□□□ -2.12
DFFAO00273 OR5AQ1P-201ENST00000527596 927 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC118273.2-201ENST00000532092 465 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.82□□□□□ -2.12
DFFAO00273 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.82□□□□□ -2.12
DFFAO00273 AC023813.2-201ENST00000564321 469 ntBASIC1.82□□□□□ -2.12
DFFAO00273 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.82□□□□□ -2.12
DFFAO00273 AC025165.5-201ENST00000602802 578 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC112220.3-201ENST00000605502 502 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC068276.1-201ENST00000605793 379 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC009233.1-201ENST00000616477 371 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AL136313.1-201ENST00000624804 202 ntBASIC1.82□□□□□ -2.12
DFFAO00273 AC004808.1-201ENST00000627671 721 ntBASIC1.82□□□□□ -2.12
DFFAO00273 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
DFFAO00273 RNU6-188P-201ENST00000364207 107 ntBASIC1.81□□□□□ -2.12
DFFAO00273 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
DFFAO00273 RNU6-748P-201ENST00000384648 107 ntBASIC1.81□□□□□ -2.12
DFFAO00273 NDUFS5P1-201ENST00000405668 289 ntBASIC1.81□□□□□ -2.12
DFFAO00273 MIR1294-201ENST00000408503 142 ntBASIC1.81□□□□□ -2.12
DFFAO00273 RNU4-22P-201ENST00000411058 166 ntBASIC1.81□□□□□ -2.12
DFFAO00273 RPL23AP39-201ENST00000415533 405 ntBASIC1.81□□□□□ -2.12
DFFAO00273 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AL445669.1-201ENST00000426743 755 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.81□□□□□ -2.12
DFFAO00273 AL645568.3-201ENST00000433683 316 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AL121890.1-201ENST00000435457 205 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.81□□□□□ -2.12
DFFAO00273 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.81□□□□□ -2.12
DFFAO00273 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
DFFAO00273 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.81□□□□□ -2.12
DFFAO00273 RPL22P13-201ENST00000493291 347 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.81□□□□□ -2.12
DFFAO00273 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.81□□□□□ -2.12
DFFAO00273 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.81□□□□□ -2.12
DFFAO00273 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.81□□□□□ -2.12
DFFAO00273 AC116337.1-201ENST00000509680 687 ntBASIC1.81□□□□□ -2.12
DFFAO00273 RNU6-581P-201ENST00000516214 105 ntBASIC1.81□□□□□ -2.12
DFFAO00273 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
DFFAO00273 RNU6-1183P-201ENST00000517054 60 ntBASIC1.81□□□□□ -2.12
DFFAO00273 RNU2-19P-201ENST00000517288 84 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.81□□□□□ -2.12
DFFAO00273 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.81□□□□□ -2.12
DFFAO00273 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
DFFAO00273 AC090079.2-201ENST00000575289 768 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AC011494.1-201ENST00000596454 237 ntBASIC1.81□□□□□ -2.12
DFFAO00273 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms