Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44357-201ENSMUST00000195897 142 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm19658-201ENSMUST00000196231 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44367-201ENSMUST00000196836 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44350-201ENSMUST00000197197 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44390-201ENSMUST00000197533 144 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44313-201ENSMUST00000198018 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44486-201ENSMUST00000198508 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44314-201ENSMUST00000199263 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44394-201ENSMUST00000199558 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44484-201ENSMUST00000199873 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44466-201ENSMUST00000200264 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm44359-201ENSMUST00000200671 138 ntBASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nr1h3Q9Z0Y9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm1401-201ENSMUST00000122048 772 ntBASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h3Q9Z0Y9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h3Q9Z0Y9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h3Q9Z0Y9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms