Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip2Q9Z0H8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.82■□□□□ 0.6
Clip2Q9Z0H8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip2Q9Z0H8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip2Q9Z0H8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip2Q9Z0H8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clip2Q9Z0H8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.8■□□□□ 0.6
Clip2Q9Z0H8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Gm25745-201ENSMUST00000174945 133 ntBASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Gm5864-201ENSMUST00000202263 970 ntBASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip2Q9Z0H8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Gm28659-201ENSMUST00000188013 759 ntBASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.78■□□□□ 0.6
Clip2Q9Z0H8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Clip2Q9Z0H8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clip2Q9Z0H8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clip2Q9Z0H8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms