Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcb1Q9Z0H3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Gm8097-201ENSMUST00000117903 829 ntBASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Gm7230-201ENSMUST00000173026 815 ntBASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcb1Q9Z0H3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Gm13418-201ENSMUST00000119097 944 ntBASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcb1Q9Z0H3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcb1Q9Z0H3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms