Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim44Q9QXA7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim44Q9QXA7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim44Q9QXA7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim44Q9QXA7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim44Q9QXA7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim44Q9QXA7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim44Q9QXA7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.81■□□□□ 0.6
Trim44Q9QXA7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim44Q9QXA7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim44Q9QXA7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 App-207ENSMUST00000227737 2827 ntBASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim44Q9QXA7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.78■□□□□ 0.6
Trim44Q9QXA7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.78■□□□□ 0.6
Trim44Q9QXA7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms