Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1aQ9QWF0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1aQ9QWF0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1aQ9QWF0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1aQ9QWF0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1aQ9QWF0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Gm7370-201ENSMUST00000219471 767 ntBASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Chaf1aQ9QWF0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1aQ9QWF0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1aQ9QWF0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.14■□□□□ 0.5
Chaf1aQ9QWF0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1aQ9QWF0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1aQ9QWF0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1aQ9QWF0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Gm27463-201ENSMUST00000183569 57 ntBASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1aQ9QWF0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms