Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Msh5Q9QUM7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Gm43435-201ENSMUST00000199996 1438 ntBASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh5Q9QUM7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.58■□□□□ 0.25
Msh5Q9QUM7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh5Q9QUM7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh5Q9QUM7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh5Q9QUM7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh5Q9QUM7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Msh5Q9QUM7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Mir7071-201ENSMUST00000184847 69 ntBASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.57■□□□□ 0.24
Msh5Q9QUM7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 AC154828.2-201ENSMUST00000220908 1070 ntBASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh5Q9QUM7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Msh5Q9QUM7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms