Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a2Q9JLR1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Gm18101-201ENSMUST00000215769 548 ntBASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sec61a2Q9JLR1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Gm10013-201ENSMUST00000106074 672 ntBASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Gm6659-201ENSMUST00000174752 547 ntBASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sec61a2Q9JLR1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sec61a2Q9JLR1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sec61a2Q9JLR1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms