Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Copb1Q9JIF7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Gm13436-201ENSMUST00000120418 567 ntBASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Copb1Q9JIF7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Copb1Q9JIF7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Gm37055-201ENSMUST00000191866 133 ntBASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Copb1Q9JIF7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Copb1Q9JIF7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms