Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpxQ9JHS4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Mir7071-201ENSMUST00000184847 69 ntBASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Odf3b-204ENSMUST00000227834 930 ntBASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClpxQ9JHS4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
ClpxQ9JHS4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClpxQ9JHS4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms