Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Gm6376-201ENSMUST00000209407 580 ntBASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Mzt1-203ENSMUST00000227948 952 ntBASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3bQ9ES34 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ube3bQ9ES34 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Gm7862-201ENSMUST00000121461 292 ntBASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Gm8655-201ENSMUST00000221159 852 ntBASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ube3bQ9ES34 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3bQ9ES34 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube3bQ9ES34 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms