Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4bQ9ES00 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.63■□□□□ 0.09
Ube4bQ9ES00 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4bQ9ES00 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Gm10602-201ENSMUST00000098239 609 ntBASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ube4bQ9ES00 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.61■□□□□ 0.09
Ube4bQ9ES00 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.6■□□□□ 0.09
Ube4bQ9ES00 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms