Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps35Q9EQH3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.22■□□□□ 0.19
Vps35Q9EQH3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vps35Q9EQH3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps35Q9EQH3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps35Q9EQH3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps35Q9EQH3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms