Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.32■□□□□ 0.36
Mms19Q9D071 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Gm28033-201ENSMUST00000184224 96 ntBASIC17.32■□□□□ 0.36
Mms19Q9D071 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Mms19Q9D071 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mms19Q9D071 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mms19Q9D071 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mms19Q9D071 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.31■□□□□ 0.36
Mms19Q9D071 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mms19Q9D071 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.31■□□□□ 0.36
Mms19Q9D071 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mms19Q9D071 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mms19Q9D071 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.31■□□□□ 0.36
Mms19Q9D071 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mms19Q9D071 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mms19Q9D071 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mms19Q9D071 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mms19Q9D071 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.3■□□□□ 0.36
Mms19Q9D071 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mms19Q9D071 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.3■□□□□ 0.36
Mms19Q9D071 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.3■□□□□ 0.36
Mms19Q9D071 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Mms19Q9D071 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.3■□□□□ 0.36
Mms19Q9D071 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mms19Q9D071 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mms19Q9D071 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.29■□□□□ 0.36
Mms19Q9D071 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.29■□□□□ 0.36
Mms19Q9D071 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.29■□□□□ 0.36
Mms19Q9D071 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.29■□□□□ 0.36
Mms19Q9D071 Gm44430-201ENSMUST00000203376 995 ntBASIC17.29■□□□□ 0.36
Mms19Q9D071 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mms19Q9D071 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mms19Q9D071 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mms19Q9D071 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mms19Q9D071 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mms19Q9D071 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mms19Q9D071 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mms19Q9D071 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms