Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Hdhd3Q9CYW4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdhd3Q9CYW4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdhd3Q9CYW4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hdhd3Q9CYW4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdhd3Q9CYW4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 App-207ENSMUST00000227737 2827 ntBASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hdhd3Q9CYW4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Gm43183-201ENSMUST00000200632 547 ntBASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdhd3Q9CYW4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hdhd3Q9CYW4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms