Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim13Q9CYB0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trim13Q9CYB0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.02■□□□□ -0
Trim13Q9CYB0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Gm10653-202ENSMUST00000139570 835 ntBASIC15.02■□□□□ -0
Trim13Q9CYB0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim13Q9CYB0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.02□□□□□ -0.01
Trim13Q9CYB0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Gm37856-201ENSMUST00000191634 999 ntBASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Gm9731-201ENSMUST00000209480 747 ntBASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim13Q9CYB0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15□□□□□ -0.01
Trim13Q9CYB0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15□□□□□ -0.01
Trim13Q9CYB0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15□□□□□ -0.01
Trim13Q9CYB0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Gm20760-201ENSMUST00000179197 648 ntBASIC15□□□□□ -0.01
Trim13Q9CYB0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trim13Q9CYB0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trim13Q9CYB0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Trim13Q9CYB0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim13Q9CYB0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms